Query= MSMg01no389_h13.b1 MSMg01no389_h13.b1 CHROMAT_FILE:
MSMg01no389_h13.b1 PHD_FILE: MSMg01no389_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:05 2005
(428 letters)
>mm_chr13_83874246_83875072
Length = 827
Score = 804 bits (416), Expect = 0.0
Identities = 425/428 (99%), Gaps = 1/428 (0%)
Strand = Plus / Plus
Query: 1 gttcctctgtgtacagttatttctcctgtaggagcctttgtatggatgtaatacacacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttcctctgtgtacagttatttctcctgtaggagcctttgtatggatgtaatacacacat 260
Query: 61 atatgtatatgcatagagcatgacataaataaaacctgcaatagcctataagaaagaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatgtatatgcatagagcatgacataaataaaacctgcaatagcctataagaaagaagc 320
Query: 121 tcctatttagaggaaagggtaagatacttttattataatgaaagccagttcacttcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctatttagaggaaagggtaagatacttttattataatgaaagccagttcacttcatca 380
Query: 181 cttggaccatggacactaatgtaaataaaatggcttaaaaaataagacaatagtagtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttggaccatggacactaatgtaaataaaatggcttaaaaaataagacaatagtagtatt 440
Query: 241 gactgtagactacttatttgcacatttgtaattcttataaatgaaatatttaaaatgatt 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactgtagactaca-atttgcacatttgtaattcttataaatgaaatatttaaaatgatt 499
Query: 301 tggtgttgggccagttccttatgcattctgcattcatgtgtataggattcaaagacgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggtgttgggccagttccttatgcattctgcattcatgtgtataggattcaaagacgttc 559
Query: 361 caaatattgatcataaaccaagtgtatatgaattaattaaatagcatatttctgccccaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 caaatattgatcataaaccaagtgtatatgaattaattaaatagcatatttctggcccaa 619
Query: 421 atatgagg 428
||||||||
Sbjct: 620 atatgagg 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space: 342742
Effective search space used: 342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_h13.g1 MSMg01no389_h13.g1 CHROMAT_FILE:
MSMg01no389_h13.g1 PHD_FILE: MSMg01no389_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:05 2005
(224 letters)
>mm_chr13_84032932_84033553
Length = 622
Score = 366 bits (189), Expect = e-106
Identities = 212/221 (95%), Gaps = 6/221 (2%)
Strand = Plus / Minus
Query: 4 tcacctatcattcagaaaaacagccctcaataaaaaaaaacaggaagcacagttgaataa 63
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 tcacctatcattcagaaaaacagccctcaat--caaaaaacaggaagcacagttgaataa 323
Query: 64 acacacctccacagaagatggacaaacatccaataa-gttaattttcagaatttgtatac 122
|||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 322 acacacctccccagaagatggacaaatatccaa-aatgttaattttcagaatttgtatac 264
Query: 123 tgctcaatagtagatttctggttatcatgaagagggccctgggtttgatgtttgatctct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgctcaatagtagatttctggttatcatgaagagggccctgggtttgatgtttgatctct 204
Query: 183 tgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtga 223
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 203 tgtgtgtg--tgtgtgtgtgtgtgtgtgtgtgtgtgtgtga 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 622
Length adjustment: 9
Effective length of query: 215
Effective length of database: 613
Effective search space: 131795
Effective search space used: 131795
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
