Query= MSMg01no390_e21.b1 MSMg01no390_e21.b1 CHROMAT_FILE:
MSMg01no390_e21.b1 PHD_FILE: MSMg01no390_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:10 2005
(445 letters)
>mm_chr13_118015652_118016497
Length = 846
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%), Gaps = 2/447 (0%)
Strand = Plus / Minus
Query: 1 agtgagtctgaggccaaccacagatatataaccctcccccaccccaccccaaataaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agtgagtctgaggccaaccacagatatataaccctcccccaccccaccccaaataaaaca 395
Query: 61 gaggagactctgtcttggattaagtggatacattagttatgccaatataactcagtaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gaggagactctgtcttggattaagtggatacattagttatgccaatataactcagtaact 335
Query: 121 tagaaaacaggggggaaaaagtattaattaaaatgaagagcaccatctttaaagaagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tagaaaacaggggggaaaaagtattaattaaaatgaagagcaccatctttaaagaagtct 275
Query: 181 ctccttcctataacatcacagaaatattgttacacctgaatgatgatgg-taccttcagg 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 274 ctccttcctataacatcacagaaatattgttacacctgaatgatgatggttaccttcagg 215
Query: 240 aggtttttttgtttttttgggtttttttcgagacaggatttctctgtatagccctggctg 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aggtttttttgttttttggggtttttttcgagacaggatttctctgtatagccctggctg 155
Query: 300 tcctcgaactcagaaatccgcctgcctctgcctcccaagtgctaggattaaaggtgcgca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tcctcgaactcagaaatccgcctgcctctgcctcccaagtgctaggattaaaggtgcgca 95
Query: 360 ccaccacc-gcccggcaggagtttatttttaataaactgttataaaggacttttttgttt 418
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ccaccaccaccccggcaggagtttatttttaataaactgttataaaggacttttttgttt 35
Query: 419 ttcttatatgttagtgtatgtgtgcta 445
|||||||||||||||||||||||||||
Sbjct: 34 ttcttatatgttagtgtatgtgtgcta 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 846
Length adjustment: 10
Effective length of query: 435
Effective length of database: 836
Effective search space: 363660
Effective search space used: 363660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_e21.g1 MSMg01no390_e21.g1 CHROMAT_FILE:
MSMg01no390_e21.g1 PHD_FILE: MSMg01no390_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:11 2005
(525 letters)
>mm_chr13_117837591_117838515
Length = 925
Score = 978 bits (506), Expect = 0.0
Identities = 521/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 1 ctcagaaagaaaaaagcctcaaatgaaaacagatattcttgctttggtttgctcaataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ctcagaaagaaaaaagcctcaaatgaaaacagatattcttgctttggtttgctcaataac 259
Query: 61 tatacagacctttccttttaaactaaacatgaaagacccaaactttctcctaacagaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatacagacctttccttttaaactaaacatgaaagacccaaactttctcctaacagaaag 319
Query: 121 aaaccaatttttt-ccccttgtaactgaacatcatctccaaattcaagaactctgagtga 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaccaatttttttccccttgtaactgaacatcatctccaaattcaagaactctgagtga 379
Query: 180 cttgacaatgtatgtcaacacatgccagggatgctggcagctgagaggtgggagctggag 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cttggcaatgtatgtcaacacatgccagggatgctggcagctgagaggtgggagctggag 439
Query: 240 aatcgagaatccaaagtcatcctcaactgcatggggcatctgaggccaactgagctacgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatcgagaatccaaagtcatcctcaactgcatggggcatctgaggccaactgagctacgt 499
Query: 300 aagaccctgaatcaaaagattcatttctctaagtccatcactgtactgccttgatactta 359
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagaccctgaatcaaaaggttcatttctctaagtccatcactgtactgccttgatactta 559
Query: 360 accattcctagcatgccctgtatgaaagaggtggataaaagagcagatggaagcctggga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 560 accattcctagcatgccctgtatgaaagaggtggataaaagagcagatggaagactggga 619
Query: 420 agtattgaattctatagctatgtgcaagacaacagaaggacacaaacatcaatcctacct 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agtattggattctatagctatgtgcaagacaacagaaggacacaaacatcaatcctacct 679
Query: 480 tcttacttctttaccagcggtttagcatgaatggccatttggcttc 525
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcttacttctttaccagcggtttagcatgaatggccatttggcttc 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
