NNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACAGGAT
CCGCGGAATTCCGTAATATATTTAACTGTTCTTGATTAAGTGATGGAGAA
AATAATTAAAATTAAAAATATAATCATATTTTGCTTGCCATTTTGTTTTC
TGCAGGGTACTTCCTTTATGGTTTGAGTGTGAAATATCTTCCCTAGGCTC
ATGTGTGTGAACATTGGTACCTGGCCGTGGTGCTAATTTGGAAGGTTGTG
GAAACTTTAGGAGGTGGAACCTCATTGCATTTGGAGGAAGTATGTCACTG
GGCCTCTATTCCCTATTTCCTATTTGCTCTCTGTTGTGTTACAATATGAC
CAGATGTCTTATACTCCTATGCCATGTTTTCTTCTGCTATGATGGACTAT
ACCACTTCAGAATAAGCCCTTCATTATTTAAGTTGATTCTTATCATTTTA
CGACAACAAGAAAAGTATTATATTGTTTATACCTTACCCTGGACACATCT
ATGCTAGAGTCAGCTGTCACAGGCCATCCATACATGAGGATCTGTGAGAA
AGCTCAGTTTACATATCTTTTTTCAGCCAACTGATAATACAAAGGAGTTA
TCCAAGATTTTTCATAGCCCAAGCTAAAGCTCTAGGAACACCAAATTGTA
CTTTTAATTGCCAATCTCTCCCGGGTTTACAAAACCAAACTGAACTATCC
CTCTATTCCCCTTATGGCTGACAAAAATCGATGTTTTTATAACCCCTCCT
TGCGAA

CGGCCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGCAGAAAATTGTGTGT
ATATCCTGGGCCAAGTGGCCAAGTACAGAAAATAAGCCACAGTGTGGTTA
TCCTACCTTGTTAAAATTACCACTTCTTGAAATACAGAGAAAAGATACTT
TTATTTAGTTTATCTTCTCTGGTTACCATAACTATGTCTTCTGTGGTCAC
CATGTGATAAGCTAAGCTTAGTACAGCCAAAAGTCTGGTCTTCTCATTTC
AAAAATGTTTCAATCCAGGTTTCTCTTAGCCTTCTCTTGGAGTATTCAGC
TTCAGATTTACAGCTATGTCAGGTTTAAGACACAATCTACAAAACCGCAC
AAAGGGAAAGCTTGTTGGAGCTCTGATAATATCTGTTCTGCACACATTAT
CCACTGTCTTTAAATGAAGGAGAAATGAGTGCTTACTCCAAATTACCTAA
TATTGGATCCTGGGTTTTCTAGAGTAACTTTCAAGCAATCACAGATAAGA
CACATAAATATATGTTGTGAGAAAGAATCACAAAGCACTAAAAGTTACAT
TTTGAATGTGTAAACATGGCCATAAATAACTAAAGAACAAGACATCCTTT
TGTGCTTCATGTCATTCAAATGGGTTTTTCTGTGTAGCCCCTGGCTGTCC
TGGAACTCTGTAGAACAAGCTGGCCTTGAACTCAGAAATCCG

Query= MSMg01no390_l04.g1 MSMg01no390_l04.g1 CHROMAT_FILE:
MSMg01no390_l04.g1 PHD_FILE: MSMg01no390_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:42 2005
         (561 letters)



>mm_chr13_26794300_26795260
          Length = 961

 Score = 1044 bits (540), Expect = 0.0
 Identities = 555/560 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgcagaaaattgtgtgtatatcctgggccaagtggccaagtacagaaaataagccaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcagaaaattgtgtgtatatcctgggccaagtggccaagtacagaaaataagccaca 260

                                                                       
Query: 61  gtgtggttatcctaccttgttaaaattaccacttcttgaaatacagagaaaagatacttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtggttatcctaccttgttaaaattaccacttcttgaaatacagagaaaagatacttt 320

                                                                       
Query: 121 tatttagtttatcttctctggttaccataactatgtcttctgtggtcaccatgtgataag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttagtttatcttctctggttaccataactatgtcttctgtggtcaccatgtgataag 380

                                                                       
Query: 181 ctaagcttagtacagccaaaagtctggtcttctcatttcaaaaatgtttcaatccaggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaagcttagtacagccaaaagtctggtcttctcatttcaaaaatgtttcaatccaggtt 440

                                                                       
Query: 241 tctcttagccttctcttggagtattcagcttcagatttacagctatgtcaggtttaagac 300
           |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 441 tctcttagccttctcttggagtattcagcttcagatttccagccatgtcaggtttaagac 500

                                                                       
Query: 301 acaatctacaaaaccgcacaaagggaaagcttgttggagctctgataatatctgttctgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaatctacaaaaccgcacaaagggaaagcttgttggagctctgataatatctgttctgc 560

                                                                       
Query: 361 acacattatccactgtctttaaatgaaggagaaatgagtgcttactccaaattacctaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 acacattatccactgtctttaaatgaaggagaaatgagtgcttactccatattacctaat 620

                                                                       
Query: 421 attggatcctgggttttctagagtaactttcaagcaatcacagataagacacataaatat 480
           | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 actggatcctgggttttctagagtaattttcaagcaatcacagataagacacataaatat 680

                                                                       
Query: 481 atgttgtgagaaagaatcacaaagcactaaaagttacattttgaatgtgtaaacatggcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgttgtgagaaagaatcacaaagcactaaaagttacattttgaatgtgtaaacatggcc 740

                               
Query: 541 ataaataactaaagaacaag 560
           ||||||||||||||||||||
Sbjct: 741 ataaataactaaagaacaag 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space:   524001
Effective search space used:   524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)