Query= MSMg01no391_d21.b1 MSMg01no391_d21.b1 CHROMAT_FILE:
MSMg01no391_d21.b1 PHD_FILE: MSMg01no391_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:23 2005
(348 letters)
>mm_chr13_60773125_60773871
Length = 747
Score = 654 bits (338), Expect = 0.0
Identities = 344/346 (99%), Gaps = 1/346 (0%)
Strand = Plus / Minus
Query: 3 ctctcctcactgaaccacagatacttcaagctttggcatgaattctagatagcaggaggc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctctcctcactgaaccacagatacttcaagctttggcatgaattctagatagcaggaggc 488
Query: 63 tgtctatccatccaacagtagggcaggcaggacgcaaaggcatcttcagcagaaccagga 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 487 tgtctatccatccaacagtagggcaggcaggacgcaaaggcatcttcagcagaa-cagga 429
Query: 123 tgggttcttaccgtgaactttctcctagcccaggtttctctacaaaggtccccagcccat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgggttcttaccgtgaactttctcctagcccaggtttctctacaaaggtccccagcccat 369
Query: 183 agctactaaccggtatgaccttcccactgtgacgagctgaggcagcccgaggatggtaaa 242
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 368 agctactaaccggtatgaccttcccactgtgacgagctgaggcagcctgaggatggtaaa 309
Query: 243 ggtaatagtggcctgtcctctctctacctgagtaaagcacatttaccttgagtgattttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtaatagtggcctgtcctctctctacctgagtaaagcacatttaccttgagtgattttt 249
Query: 303 aactcactcagttcttcagtcacatactacttgccaagaaagccaa 348
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aactcactcagttcttcagtcacatactacttgccaagaaagccaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 747
Length adjustment: 9
Effective length of query: 339
Effective length of database: 738
Effective search space: 250182
Effective search space used: 250182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_d21.g1 MSMg01no391_d21.g1 CHROMAT_FILE:
MSMg01no391_d21.g1 PHD_FILE: MSMg01no391_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:23 2005
(249 letters)
>mm_chr13_60572231_60572879
Length = 649
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%)
Strand = Plus / Plus
Query: 1 ctacgtaggagcgaaggagaaacaagagggagggtgtgggaggcacgagcgatgactgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacgtaggagcgaaggagaaacaagagggagggtgtgggaggcacgagcgatgactgtt 260
Query: 61 caaactatggagagcccagaaaaagctttcagaagaagagctatcctccaacactaccct 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaactatggagagcccaggaaaagctttcagaagaagagctatcctccaacactaccct 320
Query: 121 cgggttgctgaacgacaaatgtggtctccaagcaaaggccaaataagaactgaatgtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgggttgctgaacgacaaatgtggtctccaagcaaaggccaaataagaactgaatgtaag 380
Query: 181 aggctgcatgatttaaaacagtgcctgggaccagccttagcatctcgaaggagatgtgct 240
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 aggcagcatgatttaaaacagtgcctcggaccagccttagcatctcgaaggagatgtgct 440
Query: 241 ataaa 245
|||||
Sbjct: 441 ataaa 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
