Query= MSMg01no391_l13.b1 MSMg01no391_l13.b1 CHROMAT_FILE:
MSMg01no391_l13.b1 PHD_FILE: MSMg01no391_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:02 2005
(389 letters)
>mm_chr13_116635274_116636062
Length = 789
Score = 625 bits (323), Expect = 0.0
Identities = 378/413 (91%), Gaps = 28/413 (6%)
Strand = Plus / Minus
Query: 1 tcaatcatatccatttgactcaacttcctgaggccttctctcagcattgattacctttta 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcaattatatccatttgactcaacttcctgaggccttctctcagcattgattacctttta 431
Query: 61 aaacaatcagttagtagcaacatttttagaggtacttctgaattgattgacaaaaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaacaatcagttagtagcaacatttttagaggtacttctgaattgattgacaaaaatcat 371
Query: 121 ccatcagtacaatttttactcaagaatgtcatcaactactcacactgtaacaagaataat 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 370 ccatcagtacaatttttactcaagaatgtcatcaactactcaaactgtaacaagaataat 311
Query: 181 gaagagatttactgaatgagtattggcaaaggaggatatctcctatacttatgtcaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaagagatttactgaatgagtattggcaaaggaggatatctcctatacttatgtcaaata 251
Query: 241 atatagcttaatacatagaaaaccacataggagttagaaaaacagtgcatataa--atat 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 250 atatagcttaatacatagaaaaccacataggagttagaaaaacagtgcatataaatatat 191
Query: 299 atg----------------------tatatacatatatgcatgcacatatgtgaatatac 336
||| |||||||||||||||||| |||| |||||||||||
Sbjct: 190 atgtgtatatatatatatatatatatatatacatatatgcatgtacatgtgtgaatatac 131
Query: 337 gtatatatacatatacatcacacacatatacacatacatatacatcacataca 389
||||||||||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 130 atatatatacatatacatcacatacatatacacatac----acatcatataca 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_l13.g1 MSMg01no391_l13.g1 CHROMAT_FILE:
MSMg01no391_l13.g1 PHD_FILE: MSMg01no391_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:02 2005
(241 letters)
>mm_chr13_116476708_116477348
Length = 641
Score = 456 bits (236), Expect = e-133
Identities = 239/240 (99%)
Strand = Plus / Plus
Query: 1 acatcaaagtctctagattttatgcttttaccagttatgtgtagttcttgtttgatactt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 acatcaaagtctctagattttatgcttttaccagttatgggtagttcttgtttgatactt 260
Query: 61 tgtaaccttttatcaggaaaagtactttttggagaaaaacccttaaatttaacacaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaaccttttatcaggaaaagtactttttggagaaaaacccttaaatttaacacaaaat 320
Query: 121 ctaattcttcttctcctattgaggctggggagagtgtgtctttattaaagtgcatttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaattcttcttctcctattgaggctggggagagtgtgtctttattaaagtgcatttcta 380
Query: 181 caaagagataaacattttttaaaaaacaagcatgaatggaatccaggataaaatgcatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagagataaacattttttaaaaaacaagcatgaatggaatccaggataaaatgcatcc 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
