Query= MSMg01no392_p14.b1 MSMg01no392_p14.b1 CHROMAT_FILE:
MSMg01no392_p14.b1 PHD_FILE: MSMg01no392_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:42 2005
(340 letters)
>mm_chr13_63476117_63476860
Length = 744
Score = 623 bits (322), Expect = 0.0
Identities = 337/344 (97%), Gaps = 4/344 (1%)
Strand = Plus / Plus
Query: 1 taatgccatgtggcactggtcttgtgagccccaattcttctaaatccactctggatcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatgccatgtggcactggtcttgtgagccccaattcttctaaatccactctggatcctc 260
Query: 61 tcctccccagtgcccacatagctggcactacttagacatcacactgtaaatgaaggtgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctccccagtgcccacatagctggcactacttagacatcacactgtaaatgaaggtgca 320
Query: 121 gagacatctcgaactagaccactacatgggtggaaacacagtttatttgatgaatcaaac 180
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 gagacatctcaaactagaccactacatgggtggaaacacagtttatttgacgaatcaaac 380
Query: 181 tgtcggggggggggg----agaaggcgcagggagggcaggtcacagagagcagtgggaaa 236
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcgggggggggggggggagaaggcgcagggagggcaggtcacagagagcagtgggaaa 440
Query: 237 accctcgactgttttatggggacaggtatgaacaggaggagggatgggagccagaacagc 296
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accctcgacagttttatggggacaggtatgaacaggaggagggatgggagccagaacagc 500
Query: 297 ctgggagttagcataggggttttgatccattacagaatgtttgg 340
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgggagttagcataggggttttgatccattacagaatgtttgg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 744
Length adjustment: 9
Effective length of query: 331
Effective length of database: 735
Effective search space: 243285
Effective search space used: 243285
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_p14.g1 MSMg01no392_p14.g1 CHROMAT_FILE:
MSMg01no392_p14.g1 PHD_FILE: MSMg01no392_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:42 2005
(239 letters)
>mm_chr13_63676909_63677547
Length = 639
Score = 433 bits (224), Expect = e-126
Identities = 233/236 (98%)
Strand = Plus / Minus
Query: 1 catttgaggagaaaggcccctttgctggggtctcagaaaacaccaaaagtgaatccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 catttgaggagaaaggcccctttgctggggtctcagaaaacaccaaaagtgaatccaaag 377
Query: 61 gggagagcagagcaggtagctctagaaggggctgcttgtgggttgatctaccccttcccc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ggaagagcagagcaggtagctctagaaggggctgcttgtgggttgatctaccccttcccc 317
Query: 121 agttttttcttccagcaccaaaggcttgcttcttcctgttttgctatgttatttttgctc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 316 agttttttcttccagcaccaaaggcttgcttcttcctgttttgctatgttatccttgctc 257
Query: 181 atggtcaagtatttgcactggaaacagttttccccgattttaaggtaggagactaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atggtcaagtatttgcactggaaacagttttccccgattttaaggtaggagactaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
