NTTTTCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTCTGAAATTTATCTTTTAAACTTTCCATTTGTTTTC
TGCTTCTAGGATCAAAATGCAATATTTTTAATATTTTTTAATATTCAATT
TTCCATTATATAAAGAGAAAATCATGACAATCAAGAAATGCCAGAAGGAA
GAACATGAAAGCTTCCTTTTACTTCCCTTAACACTCCCCTTAAACAAACT
GACAGCCAAAACAGAGTGTGAATCATCCAGGAAACAGGTAAAAACAGAGC
GTTCTAGACAGGGACAGAGATACCAAGATAAATGCTTTTCTATCACTTAA
TAAATATTTGAAAATAAGTATTTGAAAAATTAGAAAACAAAGCACAAAAT
CCATAAAAGGCAAGTAGAGAAAATAATAGCTCAAATTAGTAAAACTTGAC
GTTATGAGTTACACTATGAGTTAAAATATAAGAGAGTCTCATGAAAGACC
AATACGGTTGAAGTTAGTTCTGTTGCCATGTACTGTAATGCTAAGTGCAG
TGTCCCAAGACTTAGGTGCCCCAGAGACCAGAGAGTCCACAAGTAGACCC
AGGTTATAATATGTGACCTTGTCCACAAGCTATTTCTGATTGTTAAATAA
AGATGCCTATAGTTGAGATAGGCAAGGCTGGGTCCTTCTAGCCTGAAGCT
AAGAGAAGACTACTAGGAGAGGGACAGGGGTTTGAAACCATCAGTACCCT
TG

NNNNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAAGTTGCCTATAGTTC
TAAGTCTTTGTTTGAGGCCTTTGTTCTGAGCTTCCCCATTCCATGTTACC
AAGTTCGTTGGTATCATTCTTGTTCATATTTAGGCAGCCATGTTGGTGAG
ACTTTTCTTTTAGGGAACACAATCTCATAGTAAACTTCCTGTTTCTCTGA
CTTTTACAGTCTTTCCATTTCCTCTTACACAAGGATTCCTGTACCTTAGG
TGCAAGTGTTGTGTTGTAGATGTGTCAGTTGGGACTGTGCTCCACAACTC
TGCATTTTCATTAGTTGTGGTTGTCTGTAATTGTCTCAGCCTGCTCCAGA
GAGAAGTGCCCTTGTTGAAGAGTAAGAATTAAACTTATCTGTAGATATAA
GGATTATATTCAAAATGCAGTCAGGGATGATGCTGGTTTCGTCCGTGGCA
GCTAGAAATTCTCCTCTAAGATCCACGACTTCATTAGCCCTGGGTACCTG
GCTAGGTTTCTAGGACTAGGTGTGACTTCCCTCTTGTTGAGCAGGCTTTA
CATCCAATTGAGGAGCTGTCAGTCAGTGTGAGGTATATGTGCCACTTTTA
CATTCTTGCCGCCATCCTGATGGCTGCTGTGGTTTGTAGGCATCATAAGT
GGGGTCGGGTTGTTGGTTTGATCTCTATGGTACCCACAGAGGGTGCTCTC
N

Query= MSMg01no394_e03.b1 MSMg01no394_e03.b1 CHROMAT_FILE:
MSMg01no394_e03.b1 PHD_FILE: MSMg01no394_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:35 2005
         (569 letters)



>mm_chr13_106317630_106318598
          Length = 969

 Score = 1058 bits (547), Expect = 0.0
 Identities = 560/565 (99%), Gaps = 2/565 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttctgaaatttatcttttaaactttccatttgttttctgcttctaggatcaaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaattcttctgaaatttatcttttaaactttccatttgttttctgcttctaggatcaaaa 681

                                                                       
Query: 65  tgcaatatttttaatattttttaatattcaattttccattatataaagagaaaatcatga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgcaatatttttaatattttttaatattcaattttccattatataaagagaaaatcatga 621

                                                                       
Query: 125 caatcaagaaatgccagaaggaagaacatgaaagcttccttttacttcccttaacactcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caatcaagaaatgccagaaggaagaacatgaaagcttccttttacttcccttaacactcc 561

                                                                       
Query: 185 ccttaaacaaactgacagccaaaacagagtgtgaatcatccaggaaacaggtaaaaacag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccttaaacaaactgacagccaaaacagagtgtgaatcatccaggaaacaggtaaaaacag 501

                                                                       
Query: 245 agcgttctagacagggacagagataccaagataaatgcttttctatcacttaataaatat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcgttctagacagggacagagataccaagataaatgcttttctatcacttaataaatat 441

                                                                       
Query: 305 ttgaaaataagtatttgaaaaattagaaaacaaagcacaaaatccataaaaggcaagtag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgaaaataagtatttgaaaaattagaaaacaaagcacaaaatccataaaaggcaagtag 381

                                                                       
Query: 365 agaaaataatagctcaaattagtaaaacttgacgttatgagttacactatgagttaaaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaaaataatagctcaaattagtaaaacttgacgttatgagttacactatgagttaaaat 321

                                                                       
Query: 425 ataagagagtctcatgaaagaccaatacggttgaagttagttctgttgccatgtactgta 484
           |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 320 ataagagagtctcatgaaagaccaatactgttgaagtttgttctgttgccatgtactgta 261

                                                                       
Query: 485 atgctaagtgcagtgtcccaagacttaggtgccccagagaccagagagtccacaagtaga 544
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgctaagtgca--gtcccaagacttaggtgccccagagaccagagagtccacaagtaga 203

                                    
Query: 545 cccaggttataatatgtgaccttgt 569
           |||| ||||||||||||||||||||
Sbjct: 202 cccaagttataatatgtgaccttgt 178


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)