Query= MSMg01no399_j19.b1 MSMg01no399_j19.b1 CHROMAT_FILE:
MSMg01no399_j19.b1 PHD_FILE: MSMg01no399_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:40 2005
(244 letters)
>mm_chr13_20130687_20131330
Length = 644
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 ctttagtaagaaagtctagttggtgcattttctgttgcttgtattttgaagggaggatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttagtaagaaagtctagttggtgcattttctgttgcttgtattttgaagggaggatgt 260
Query: 61 gagtcacagatttcacagggaaagtctcctgattaattattgtgattagcagtccaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtcacagatttcacagggaaagtctcctgattaattattgtgattagcagtccaagaa 320
Query: 121 aattcaaagtggcagactgaatcttatatgagatggggcatttgagcagctgttggagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattcaaagtggcagactgaatcttatatgagatggggcatttgagcagctgttggagct 380
Query: 181 gtgcgtatggggaaaggtgtattttgtataatgtactagatatggctctcttcagggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgcgtatggggaaaggtgtattttgtataatgtactagatatggctctcttcagggaag 440
Query: 241 gaa 243
|||
Sbjct: 441 gaa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no399_j19.g1 MSMg01no399_j19.g1 CHROMAT_FILE:
MSMg01no399_j19.g1 PHD_FILE: MSMg01no399_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:40 2005
(472 letters)
>mm_chr13_20317740_20318610
Length = 871
Score = 866 bits (448), Expect = 0.0
Identities = 466/472 (98%), Gaps = 1/472 (0%)
Strand = Plus / Minus
Query: 1 agcatagcatgtgaacactgcctcttttctctggagatacacactgagtgctaggacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agcatagcatgtgaacactgcctcttttctctggagatacacactgagtgctaggacaag 612
Query: 61 ccttcacagctgtctgtcattcaaggggccttgaccctacatatacacgagtattattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ccttcacagctgtctgtcattcaaggggccttgaccctacatatacacgagtattattaa 552
Query: 121 tgcagtgaatacggttttttataagcgaattcaattaggactggcattttccttaagaac 180
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 551 tgcagtgaatacggttttttataagctaattaaattaggactggcattttccttaagaac 492
Query: 181 ctaactaaagataatgaccagagaaaacatttattcagtagacttattcgttgccattga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 491 ctaactaaagataatgaccagagaaaacatttattcagtagacttattcgttgcca-tga 433
Query: 241 atgtgcctgcccaaatgaattagctaattgttattaaggacatctatttagtaaattaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atgtgcctgcccaaatgaattagctaattgttattaaggacatctatttagtaaattaaa 373
Query: 301 tgccttgttcatgaaaggtctgaaatgagatttcagtttcttactataaaaagatcctgc 360
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 372 tgccttgttcatgaaaggtctgaaatgagatttgagtttcttaccataaaaagatcctgc 313
Query: 361 taagcaaggtagtatgaatcagagaaacactgactaatctgaaaagaaaagatgctatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 312 taagcaaggtagtatgaatcagagaaacactgactaatctgaaaagaaaagatgctagca 253
Query: 421 aaataggaagatttagataaaacagagtaaaagcctaggatgtccagatagc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaataggaagatttagataaaacagagtaaaagcctaggatgtccagatagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 871
Length adjustment: 10
Effective length of query: 462
Effective length of database: 861
Effective search space: 397782
Effective search space used: 397782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
