TCATXXXXXXXXXXXXXXXXXXXXXXXXCTATTGCAAGAAATCCGCGGAA
TTCCTGAATTATCGGAATTTGGAAGCTGAGTCTGTCCAGGAACTAGAGAG
AGCAGTAATATCATGGATCCATTGCTCTGTGGCCTGGACCAATCTCTAGA
CAATGCACAGATACCATGCAGGACCTAATGCCACATCTCTATTGTAAACT
GAGTCTCTCCATAGCAAAAAGTTCTCACAGGATTCACTGATCCTTAACCT
CTAATGTGACTGATGCAGAAGTATATATCTATGGATCTAAGGGAACTGGA
AAATGAGGTTAAAGATGACCGCTCAAATGAGAAACAAGTAAAATTTGAGA
GAACCAAGAAGAGAGCAAGAAAAGAAAATCTATTCAGTATAACTATTTGC
TCCTTATCTCCTTTTCCATAAAGATTTTATTTGATCTAGAATGGAGTTGT
GTCAACCTAAGAAAGTCATGCACTGATGCGCAGCCTACCAACCACTCCAA
GAGTACAACAGCACAGGTGAGCTTCGTAGTCTTTCCTGTGGCACCGGGCT
GCCTACAGCTAGAGTTTGAAGCCATTGCTGCTGCAAGACGAAATTGTACT
GGTAGCACACAACTTGCTCTGGAGAAGACCTAAGTTCAAACCCAAACTAC
GGTTTTTCTAGAATGTTCATCTCTTTGTGCTTCATGAAAAATAAATGTAT
ATTAATTTATGACTCGAAAGTCATCAAATATCATCATTTT

CACGATACTGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTTTCCCCGAAATTCTTTGTTTAGCTCTGAGCCCCATTTTT
AAATGGGTTATTTGAATTTCTAGAGTCCAGCTTCTTGAGCTCTTTGTATA
TATACCTGCCGTGTGGCTGACCTCCATATTGGATTGATTCAGATGGTGTG
ACTGGCTTCTCTCCCCTCCCTTCCAAGTCTCCTCTTCTAAGTAGCTGGTG
AGATCTGCAGCTTGTATGCACTGGGATTTTGCTTTTTAAACTCTAATAAA
ATTCCCTTGGGCTTCCTTATATAAAATAAAAATAATATTCTCCTCTATGG
ATGCAGTGGATTTTGTTTATCTCTACATGCACTGCTCGATCTTTTGAGAG
TCCATTTCTTCTCTCTCCTGTTTTAAATGTCGCTGCTGTGTGTGTGTGTG
TGTGCGCGTGTACCTTTCCTGTGAATATATTTCACTTTCTGTAAGGCACA
CACAAATTTTACGTTCAACTTTATGCCTTATAACTGCTCACCTTGTTTTT
TGTTCAAGAGCTCTACCACTCTCCTTGTTGTTACGATAGCCTATTTTCCC
CTGCTGTATATTTTATCCCCATATGATTGCTTCATATTTTTTCCCTATCT
GCTACTTTCTTTGTTTCTTATATTCTTCGTTCTTCCTCTTTCGTTTTTTT
CTTTTCCTTTATACCCCTCCTTCCCTCATTTTTTCTCTTCTTCCATTCTT
TCTTTGCCTTTTCATTTCT

Query= MSMg01no399_j23.b1 MSMg01no399_j23.b1 CHROMAT_FILE:
MSMg01no399_j23.b1 PHD_FILE: MSMg01no399_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:41 2005
         (519 letters)



>mm_chr13_70339042_70339960
          Length = 919

 Score =  957 bits (495), Expect = 0.0
 Identities = 513/519 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggaagctgagtctgtccaggaactagagagagcagtaatatcatggatccattgctctg 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tggaagctgagtctgttcaggaactagagagagcagtaatatcatggatccattgctctg 660

                                                                       
Query: 61  tggcctggaccaatctctagacaatgcacagataccatgcaggacctaatgccacatctc 120
           |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 659 tggcctggaccaatctctagacaatgtacagataccatgcaggacctgatgccacatctc 600

                                                                       
Query: 121 tattgtaaactgagtctctccatagcaaaaagttctcacaggattcactgatccttaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tattgtaaactgagtctctccatagcaaaaagttctcacaggattcactgatccttaacc 540

                                                                       
Query: 181 tctaatgtgactgatgcagaagtatatatctatggatctaagggaactggaaaatgaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tctaatgtgactgatgcagaagtatatatctatggatctaagggaactggaaaatgaggt 480

                                                                       
Query: 241 taaagatgaccgctcaaatgagaaacaagtaaaatttgagagaaccaagaagagagcaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 taaagatgaccgctcaaatgagaaacaagtaaaatttgagagaaccaagaagagagcaag 420

                                                                       
Query: 301 aaaagaaaatctattcagtataactatttgctccttatctccttttccataaagatttta 360
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 419 aaaagaaaatctattcagtataattatttgctccttatctccttttccataaagatttta 360

                                                                       
Query: 361 tttgatctagaatggagttgtgtcaacctaagaaagtcatgcactgatgcgcagcctacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tttgatctagaatggagttgtgtcaacctaagaaagtcatgcactgatgcgcagcctacc 300

                                                                       
Query: 421 aaccactccaagagtacaacagcacaggtgagcttcgtagtctttcctgtggcaccgggc 480
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 299 aaccactccaagagtacaacagcacaggtgagcttcgtagtctcccctgtggcaccgggc 240

                                                  
Query: 481 tgcctacagctagagtttgaagccattgctgctgcaaga 519
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgcctacagctagagtttgaagccattgctgctgcaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no399_j23.g1 MSMg01no399_j23.g1 CHROMAT_FILE:
MSMg01no399_j23.g1 PHD_FILE: MSMg01no399_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:41 2005
         (362 letters)



>mm_chr13_70162822_70163583
          Length = 762

 Score =  646 bits (334), Expect = 0.0
 Identities = 355/362 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctttgtttagctctgagccccatttttaaatgggttatttgaatttctagagtccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttgtttagctctgagccccatttttaaatgggttatttgaatttctagagtccag 260

                                                                       
Query: 61  cttcttgagctctttgtatatatacctgccgtgtggctgacctccatattggattgattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcttgagctctttgtatatatacctgccgtgtggctgacctccatattggattgattc 320

                                                                       
Query: 121 agatggtgtgactggcttctctcccctcccttccaagtctcctcttctaagtagctggtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatggtgtgactggcttctctcccctcccttccaagtctcctcttctaagtagctggtg 380

                                                                       
Query: 181 agatctgcagcttgtatgcactgggattttgctttttaaactctaataaaattcccttgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatctgcagcttgtatgcactgggattttgctttttaaactctaataaaattcccttgg 440

                                                                       
Query: 241 gcttccttatataaaataaaaataatattctcctctatggatgcagtggattttgtttat 300
           ||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcttccaaaaataaaataaaaataatattctcctctatggatgcagtggattttgtttat 500

                                                                       
Query: 301 ctctacatgcactgctcgatcttttgagagtccatttcttctctctcctgttttaaatgt 360
           |||||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||
Sbjct: 501 ctctacatgcactgctcgattttttgagaggccatttcttctctttgctgttttaaatgt 560

             
Query: 361 cg 362
           ||
Sbjct: 561 cg 562


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space:   265809
Effective search space used:   265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)