Query= MSMg01no399_p10.b1 MSMg01no399_p10.b1 CHROMAT_FILE:
MSMg01no399_p10.b1 PHD_FILE: MSMg01no399_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:06 2005
(324 letters)
>mm_chr13_90148326_90149054
Length = 729
Score = 536 bits (277), Expect = e-157
Identities = 315/331 (95%), Gaps = 7/331 (2%)
Strand = Plus / Minus
Query: 1 ggccattggcattttatgctatgcactgtaaagttatacttttgaaatacctcatagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggccattggcattttatgctatgcactgtaaagttatacttttgaaatacctcatagttt 427
Query: 61 ggtattttgatacattgtataacttttgcccagtgtttcctgtgtcgcagtgtctgtgag 120
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 426 ggtattttgatacattgtataacttttgcccagtgtttcctgtgtcacagtttctgtgag 367
Query: 121 aaacgcaaactatgcaccagaagcagtcattgcattcctgagaggtttttcctctggtgt 180
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 366 aaacacaaactatgcaccagaagcagtcattgcattcctaagaggtttttcctctggtat 307
Query: 181 tgtctgtcactctggaaggctactgtgttaa-----tcaactttgttcaaatggcatgcc 235
|||||||||||||||| |||||||||||||| ||||| |||||||||||||||| |
Sbjct: 306 tgtctgtcactctggagggctactgtgttaaagtaatcaaccttgttcaaatggcatgtc 247
Query: 236 acattctaagtaaggaaagtgaagacacacacccagtcctcacagggtgtgagtgtgtgt 295
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 246 acattctaagtaaggaaagtgaagacacacacccagtcctcacagggtgtgtgtgtgtgt 187
Query: 296 gtgtgtg--agtgagtgtgtgtgtgtgtgtg 324
||||||| ||||||||||||||||||||||
Sbjct: 186 gtgtgtgtgagtgagtgtgtgtgtgtgtgtg 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 729
Length adjustment: 9
Effective length of query: 315
Effective length of database: 720
Effective search space: 226800
Effective search space used: 226800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_p10.g1 MSMg01no399_p10.g1 CHROMAT_FILE:
MSMg01no399_p10.g1 PHD_FILE: MSMg01no399_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:06 2005
(243 letters)
>mm_chr13_90019676_90020318
Length = 643
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%)
Strand = Plus / Plus
Query: 1 attcaagtgtgtatctgcccttttaaatcaatgaaaacttttttttcattttgcagacac 60
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 201 attcaagtgtgtatctgcccttctaaatcaatgaaaactttttttccattttgcagacac 260
Query: 61 ttacatttataataaaaagtcggtctcatgcactcaagggtgatattcatgtgcacactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacatttataataaaaagtcggtctcatgcactcaagggtgatattcatgtgcacactt 320
Query: 121 cactttcccccttatctctactgaagagttttatttaagcgctggagacaaaacccatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactttcccccttatctctactgaagagttttatttaagcgctggagacaaaacccatgg 380
Query: 181 ctttgcacttgctgggcatgcactctcccactgaagcaaaccttagacctctccaaagaa 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttgcacttgctgggcatgcgctctcccactgaagcaaaccttagacctctccaaagaa 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
