Query= MSMg01no402_p19.b1 MSMg01no402_p19.b1 CHROMAT_FILE:
MSMg01no402_p19.b1 PHD_FILE: MSMg01no402_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:06 2005
(247 letters)
>mm_chr13_52951639_52952285
Length = 647
Score = 445 bits (230), Expect = e-129
Identities = 243/248 (97%), Gaps = 3/248 (1%)
Strand = Plus / Minus
Query: 1 cccttcttataagatccattgtaaaaaaaaaaaaaagtg-gtgtgtgtgtgtgtgtgtgc 59
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 453 cccttcttataagatccattgt--aaaaaaaaaaaagtgtgtgtgtgtgtgtgtgtgtgt 396
Query: 60 gtgtgtgtacagatgcccatggagccagaagaggtagcagagcacacatgtggtgtgcat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtgtgtgtacagatgcccatggagccagaagaggtagcagagcacacatgtggtgtgcat 336
Query: 120 aaaagctcagccacagagacatacacacaaattgttttttaagtttttaagtctaaaaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aaaagctcagccacagagacatacacacaaattgttttttaagtttttaagtctaaaaca 276
Query: 180 agcaaacctgtgacaggattttccctgtccaatcacgttagggcagcaggatgcctgtga 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 275 agcaaacctgtgacaggattttccctgtccaatcacgttagggcagcaggaggcctgtga 216
Query: 240 ctggacag 247
||||||||
Sbjct: 215 ctggacag 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_p19.g1 MSMg01no402_p19.g1 CHROMAT_FILE:
MSMg01no402_p19.g1 PHD_FILE: MSMg01no402_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:06 2005
(333 letters)
>mm_chr13_52802536_52803268
Length = 733
Score = 569 bits (294), Expect = e-166
Identities = 324/338 (95%), Gaps = 10/338 (2%)
Strand = Plus / Plus
Query: 1 ctaacaccatgggagaaaatgctgtgggatttgtggccttaaggtaccaagatccagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaacaccatgggagaaaatgctgtgggatttgtggccttaaggtaccaagatccagggt 260
Query: 61 ctgtaaaacagcaaagggtgactagaactgtccctcccccatcacctagttttacttttg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ctgtaaaacagcaaagggtgactagaactgtccctcccccatcacctggttttacttttg 320
Query: 121 tcaccccttcctcactgtaccaagattttagaaatctgaagccataccctgaacagaa-c 179
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||| || |
Sbjct: 321 tcaccccttcctcactgtgccaagactttagaaatctgaagccataccctgaaca-aagc 379
Query: 180 tgaccacagagtgtatagtgtctgaattccttccctcatggtcattaccgtctgacctcc 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaccacagagtgtagagtgtctgaattccttccctcatggtcattaccgtctgacctcc 439
Query: 240 acatttaccccatgttctctcacagacagacagacaggcagacaaacagaca----gaca 295
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 440 acatttaccccatgttctctcacagacagacagacag----acaaacagacaaacagaca 495
Query: 296 gatggatggacagatggatgaacagacagacatacaca 333
||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gatggatggacagatggatgaacagacagacatacaca 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
