XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGCGGAATTCACAA
CTCACTTAAAGAATACAGGAGAACACTGCTAAAGAGTTACAAGTCCTTAA
AGAAAAACAGGAAAACACTGCTAAAGAGTTACAAGTCCTTAAAGAAAAAC
AGGAAAACACAACCAAACAGGTAGAAGTCCTTATAGAAAAACAGGAAAAC
ACATCCAAACAGGTGATGGAAATGAACAAAACCATACTAGACCTAAAAAG
GGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCGACGCTGGAGATAG
AAACCCTAGGAAAGAAATCTGGAACCATAGATGCCAGCATCAGCAACAGA
ATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGACTCCATAGAGAA
CATCGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGATCCTAACTC
AAAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACCTACGGATA
ATAGGAGTGGATGAGAATGAAGATTTTCAACTCAAAGGACCAGCAAACAT
CTTCAACAAAATTATTGAAGAANACTCCCCACATCTAAAGAAAGAGATGC
CCATGAACATACAAGAAGCCTACAGAACTCCCAATAGACATGGACCAGAA
AAAAAATCCTCCCCGACCCTTATTAATCCGGACCCCCAAAGGCCTTATTT
ATAGAAAGAAAATCTAAAGCCGTCAGGGGAAAAAGGCCAGGTACCATAAT
AAGGGGAAGCCAATTATAAAATAACCCCATATTTTTN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCACATCGTTCAGTGGCTTGAGAGGAAGCTACTA
AGCCAGACTGTGGACTGAACTAACTCTGGGTTAGACATGTGATGAGCATG
TGAAGAGTTCCAGACTCACAGTCAAAGATTCAGAGGCAGGTAGGAGGCCC
AAGCTAGCTCATCTGAATACCTAACCCTCCCATGAAAACTGGAGACAGAG
TCTCTGGCCCTAAAAGCCAGTACTTCCAAGGAAAGAGATGCTTCAACTTT
ACTAGGACTTATGCCACCACGGAAAGAAATGGAATAACTGGAATTTTAAA
TTTAAAACATAAAAATACAAAGTAAAAGAGGAGGAAGATTTAACCAACAA
ATCTTTATCCAAATAAATCAAAAGAAGACTCAAATTAATAAAAGCAGCCA
TGAAACGGGAGACATTTCAACAGTCACTGAGATCTAGAGAATTATAAAGA
TTTACTTTCAAAAAATCTGTGTTCTAACATAGCAATGGAAGTGTACATCT
TTAATCTCAGCCCATATGAGGAGGCAGAGGTGCTGGTCTGCGTATTGGAG
GAGGTTAACCATGGAGATTTCTGGCCCCAACCGGTGCTAGGGTCCTACCC
TTGCGGTAAGGATTTTTGTGCAGGTAGAAATTGCCTCCTTCTCCCCTGTT
GTTTTTTTCTACTGCCTTTTAATCCGTCCCCCCATCCGTTCCTTGTTTGT
TTTCAATTTCGTCACCC

Query= MSMg01no403_c18.g1 MSMg01no403_c18.g1 CHROMAT_FILE:
MSMg01no403_c18.g1 PHD_FILE: MSMg01no403_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:22 2005
         (452 letters)



>mm_chr13_15472331_15473185
          Length = 855

 Score =  833 bits (431), Expect = 0.0
 Identities = 448/455 (98%), Gaps = 3/455 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacatcgttcagtggcttgagaggaagctactaagccagactgtggactgaactaactct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cacatcgttcagtggcttgagaggaagctactaagccagactgtggactgaactaactct 450

                                                                       
Query: 61  gggttagacatgtgatgagcatgtgaagagttccagactcacagtcaaagattcagaggc 120
           |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 449 gggttagacatgtgatgagcctgtgaagagttccagactcacagtgaaagattcagaggc 390

                                                                       
Query: 121 aggtaggaggcccaagctagctcatctgaatacctaaccctcccatgaaaactggagaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aggtaggaggcccaagctagctcatctgaatacctaaccctcccatgaaaactggagaca 330

                                                                       
Query: 181 gagtctctggccctaaaagccagtacttccaaggaaagagatg---cttcaactttacta 237
           |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||
Sbjct: 329 gagtctctggccctaaaagccagtacttccaaggaaagagatgcttcttcaactttacta 270

                                                                       
Query: 238 ggacttatgccaccacggaaagaaatggaataactggaattttaaatttaaaacataaaa 297
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 269 ggacttatgccaccacggaaagaaatggactaactggaattttaaatttaaaacataaaa 210

                                                                       
Query: 298 atacaaagtaaaagaggaggaagatttaaccaacaaatctttatccaaataaatcaaaag 357
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atacaaagtaaaagaggaagaagatttaaccaacaaatctttatccaaataaatcaaaag 150

                                                                       
Query: 358 aagactcaaattaataaaagcagccatgaaacgggagacatttcaacagtcactgagatc 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aagactcaaattaataaaagcagccatgaaacgggagacatttcaacagtcactgagatc 90

                                              
Query: 418 tagagaattataaagatttactttcaaaaaatctg 452
           |||||||||||||||||||||||||||||||||||
Sbjct: 89  tagagaattataaagatttactttcaaaaaatctg 55


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 855
Length adjustment: 10
Effective length of query: 442
Effective length of database: 845
Effective search space:   373490
Effective search space used:   373490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)