Query= MSMg01no404_l23.b1 MSMg01no404_l23.b1 CHROMAT_FILE:
MSMg01no404_l23.b1 PHD_FILE: MSMg01no404_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:31 2005
(457 letters)
>mm_chr13_21634160_21635016
Length = 857
Score = 868 bits (449), Expect = 0.0
Identities = 452/453 (99%)
Strand = Plus / Plus
Query: 5 actataggttatacaaggccttacctacagtctgaacttgtcttccttgtccaggaagtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 actataggttatacaaggccttacctacagtctgaacttgtcttccttgtccaggaagtg 264
Query: 65 acatatattcgtcctgattttccaaatctgctcacttcccttgttcagttccatgctcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acatatattcgtcctgattttccaaatctgctcacttcccttgttcagttccatgctcac 324
Query: 125 ttaccaggcgatcatatgatttctttgagtgaattaacttcgaagtttcacgtggaggta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaccaggcgatcatatgatttctttgagtgaattaacttcgaagtttcacgtggaggta 384
Query: 185 atgaaaaatgcaaaatgtgagactgtttccctttcctcagaaggcacacagttgagggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgaaaaatgcaaaatgtgagactgtttccctttcctcagaaggcacacagttgagggaa 444
Query: 245 gggacagtttgtaagcaggtcacaaaaggtgcagggtgaatgtgagtgactaaaggactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggacagtttgtaagcaggtcacaaaaggtgcagggtgaatgtgagtgactaaaggactt 504
Query: 305 ctccatattaaggctcacaacccctttgagccctgtggggacccaatcttgatcaaagtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctccatattaaggctcacaacccctttgagccctgtggggacccaatcttgatcaaagtc 564
Query: 365 cctgaactccagcaatcatgacttcatctcctttgtggtttcccaattgtaactgtaggg 424
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccgaactccagcaatcatgacttcatctcctttgtggtttcccaattgtaactgtaggg 624
Query: 425 acaatactatggaagatgattccccagggagac 457
|||||||||||||||||||||||||||||||||
Sbjct: 625 acaatactatggaagatgattccccagggagac 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_l23.g1 MSMg01no404_l23.g1 CHROMAT_FILE:
MSMg01no404_l23.g1 PHD_FILE: MSMg01no404_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:31 2005
(543 letters)
>mm_chr13_21825183_21826129
Length = 947
Score = 932 bits (482), Expect = 0.0
Identities = 527/550 (95%), Gaps = 19/550 (3%)
Strand = Plus / Minus
Query: 1 ttgtccctccgtctgtagtgctcgatggctcaggccaaggttgcagcattttcagacata 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 871 ttgtccctccgtctgtagtgctcgatggcttaggccaaggttgcagcattttcagacata 812
Query: 61 cagggactcagacctcgagcaaccgtcatctgaatcactgggtctccaccccttctctta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 cagggactcagacctcgagcaaccgtcatctgaatcactgggtctccaccccttctctt- 753
Query: 121 gctgtgtctacccctccccctcctacaaactaagtgctttgtctagtggacagccttctt 180
|| ||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 752 -ct---tct----ctccccctcctacacactaagtgctttgtctagtggacagccttctt 701
Query: 181 ctctgcacccaggcctttctcctattccacctaatcctttcccaatcccaccccacctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctctgcacccaggcctttctcctattccacctaatcctttcccaatcccaccccacctcc 641
Query: 241 ccca------ccccccaaattaatcacatactctgcttactgaagtcttcttgcctatac 294
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cccaccccccccccccaaa--aatcacatactctgcttactgaagtcttcttgcctatac 583
Query: 295 caatgccttctgtcttcccctctgagctaaaggccatgcacaattagcctcttcccctta 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 caatgccttctgtcttcccctctgagctaaaggccatgcacaattagcctcttcccctta 523
Query: 355 cccaccttcttcccctcctccctgctcctccttcttctttacaggttccacttataggtt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cccaccttcttcccctcctccctgctcctccttcttctttacaggttccacttataggtt 463
Query: 415 aaccctctcccctttatccacttccaccctccctgccttctctgcttcctgcctctactt 474
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 462 aaccctctcccctttatccacttccaccctccctgcctactctgcttcctgcctctactt 403
Query: 475 cgttgctgacacccacaccctggccccatccacactggcctactacccctgga-tcctcc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 402 cgttgctgacacccacaccctggccccatccacactggcctactacccctggaatc-tcc 344
Query: 534 cctgcagcct 543
|||| |||||
Sbjct: 343 cctgtagcct 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 947
Length adjustment: 10
Effective length of query: 533
Effective length of database: 937
Effective search space: 499421
Effective search space used: 499421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
