Query= MSMg01no405_g10.b1 MSMg01no405_g10.b1 CHROMAT_FILE:
MSMg01no405_g10.b1 PHD_FILE: MSMg01no405_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:22 2005
(244 letters)
>mm_chr13_74090460_74091103
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 tgtccatctcgtcagacaaagaggaggctaccaggccagaccaagagacatggaagccat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtccatctcgttagacaaagaggaggctaccaggccagaccaagagacatggaagccat 385
Query: 61 gggccaaaatagtctcagagctagtatggacagatttttttttttaactctacctagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gggccaaaatagtctcagagctagtatggacagatttttttttttaactctacctagcca 325
Query: 121 gaacagagaccttctagaaaactttggccatgaaaagagacccagcaatactactctttt 180
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 gaacagagaccatctagaaaactttggccatgagaagagacccagcaatactactctttt 265
Query: 181 gcattatggtcacacagccttgggataatggccgtactagatcacaagtaacaacttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcattatggtcacacagccttgggataatggccgtactagatcacaagtaacaacttcat 205
Query: 241 tcca 244
||||
Sbjct: 204 tcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_g10.g1 MSMg01no405_g10.g1 CHROMAT_FILE:
MSMg01no405_g10.g1 PHD_FILE: MSMg01no405_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:22 2005
(451 letters)
>mm_chr13_73868302_73869147
Length = 846
Score = 816 bits (422), Expect = 0.0
Identities = 441/450 (98%), Gaps = 5/450 (1%)
Strand = Plus / Plus
Query: 1 ccaccctggttggctttcccttctctggctgccaggcaaatggaggtgggtggtgaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaccctggttggctttcccttctctggctgccaggcaaatggaggtgggtggtgaaact 260
Query: 61 aacttcctaagaaagacgccctggttttcaaaagagaaactatctttctcctgagctgga 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttcctaagaaagacaccctggttttcaaaagagaaactatctttctcctgagctgga 320
Query: 121 tacatcttggagaggcttcacacatcactcacagtactagatgcaacatccaggctacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacatcttggagaggcttcacacatcactcacagtactagatgcaacatccaggctacag 380
Query: 181 tataggtgggagcagctaattgaccttctcctgtcagcctctctgctgctgaaggacagc 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tataggtgggagcagctaattgaccttctcctgtcagcctctctactgctgaaggacagc 440
Query: 241 tatgatatttgagccacaattaaccataatggacccagttcccttaaatttccttccttt 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgatagctgagccacaattaaccataatggacccagttcccttaaatttccttccttt 500
Query: 301 attctttgcctctttatcagataccttctttctgctccactctgcaaggtgtgcttcaga 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attctttgcctctttat-----accttctttctgctccactctgcaaggtgtgcttcaga 555
Query: 361 gaggcccagtgtgctttaatatctgcctcctgtcactttcagagcttgacacaaggcgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gaggcccagtgtgctttaatatctgcctcctgtcactttcagagcttgacacaaggcgct 615
Query: 421 tttaataaatgtttgagtgaacaaatacac 450
||||||||||||||||||||||||||||||
Sbjct: 616 tttaataaatgtttgagtgaacaaatacac 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 846
Length adjustment: 10
Effective length of query: 441
Effective length of database: 836
Effective search space: 368676
Effective search space used: 368676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
