NNTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCAGTTTTCTATCCATTATCTTTAAGTTCACCAAGAAGGTTTGG
GAATCCCTGTGCTCTGTGCGCACAGGAGAGAAAGGGGAAGTTGTTTTTAT
CTGTTCTGTAAACTGTCAAGTAAAGCTCCTGCCTCAATTCCAAATACACA
CTTTTCACTAACACGAACACATGTGCCCATAGTTACAGAGACTGTTTTAG
AAAAACATGGTCGTTATATGGGATTCTTTTTAAATTTATTTTATTTTATT
TTATTTTTAATTCAAATTTTACACTCCATATTCCATTTCCCACCCCCCAT
CCACCCTCCAACTGCTCCACATCCCACATCTCCTTCCCTCCCCACCTGTC
TCCATGTGGATGCCCCCACTCCCCACCCCACCTGACCTCTAAACTCCCTG
GGGCCTCCAGTCTCTTGAGCATTAGGTGCATCATCTCTGAATGAACACAG
ACCCAGAAGTCCTCTACTGTATGTGTGTTGGTCTGGAAATTGCAAACTGG
GATTTTTTTTTATCATGAATTTGGGATTTGGGAGAAATTTTGACTCAAAA
TTTANTAAGAATAANAGGCTTTCGTGAGACTTTATTGGTGGCACCTAGCA
TGGTAGAAAAAGTCTTTATTTCCATGTCTAACCCCGGAATTAAAATCTCC
CTTTTGGACACAAAAAAAAATAATCCCTCCCCAAACTAACAAAAAAATAA
GAAGTGTTTTATAAAAAACAGAAATGGCTCCA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTATCCTGTGACATTTTAAACACACTT
GTATGGGCTCTTCAGGTCTGATTGGCTGCTTTCCTTCTCTCTCTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTTCTCTCTCTTTCTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTCCCTTTCTTCCTTTCTTCCTTTCTTTCTCTCTTTCTTTTCTTCT
TTCTTTCTTTTTTATCACACTAATACAATTTATTTTAAAATATACAATTC
ATTATTGACATTTTTCAAGTCAACAAAATAACTTATAATAGTTAAATGCC
TCTTAAATGTACGTGATACCTTCTGAAACTAAAAGTAATATGCACTCAAC
CAATTTTAAAAATCTATTTGGGATATTAAACATGATAGAAGTAGAAGAAA
ATAGCTCACTTCTCTTGTAAGTACAGTCTCTACCGTGGTTACAGGTTGCT
CCTCTGCACCTTCATCTACTAAATATACTAATTTCATGTGGAGAAGATAA
AACAAATTATTATCTGGAAGTCCAAAGCATGTTTACTAGATCAACATGGT
CAAAATATAACTAAAGTTAAAGGTCCAAGAAACCTACATTCCCTGCGGAG
ATAAAN

Query= MSMg01no405_o21.b1 MSMg01no405_o21.b1 CHROMAT_FILE:
MSMg01no405_o21.b1 PHD_FILE: MSMg01no405_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:04 2005
         (529 letters)



>mm_chr13_83591848_83592776
          Length = 929

 Score =  994 bits (514), Expect = 0.0
 Identities = 523/526 (99%), Gaps = 1/526 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccagttttctatccattatctttaagttcaccaagaaggtttgggaatccctgt 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagttttctatacattatctttaagttcaccaagaaggtttgggaatccctgt 263

                                                                       
Query: 64  gctctgtgcgcacaggagagaaaggggaagttgtttttatctgttctgtaaactgtcaag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gctctgtgcgcacaggagagaaaggggaagttgtttttatctgttctgtaaactgtcaag 323

                                                                       
Query: 124 taaagctcctgcctcaattccaaatacacacttttcactaacacgaacacatgtgcccat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaagctcctgcctcaattccaaatacacacttttcactaacacgaacacatgtgcccat 383

                                                                       
Query: 184 agttacagagactgttttagaaaaacatggtcgttatatgggattctttttaaatttatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agttacagagactgttttagaaaaacatggtcgttatatgggattctttttaaatttatt 443

                                                                       
Query: 244 ttattttattttatttttaattcaaattttacactccatattccatttcccaccccccat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttattttattttatttttaattcaaattttacactccatattccatttcccaccccccat 503

                                                                       
Query: 304 ccaccctccaactgctccacatcccacatctccttccctccccacctgtctccatgtgga 363
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 504 ccaccctccaactgctccacatcccacacctccttccctccccacctgtctccatgtgga 563

                                                                       
Query: 364 tgcccccactccccaccccacctgacctctaaactccctggggcctccagtctcttgagc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgcccccactccccaccccacctgacctctaaactccctggggcctccagtctcttgagc 623

                                                                       
Query: 424 attaggtgcatcatctctgaatgaacacagacccagaagtcctctactgtatgtgtgttg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attaggtgcatcatctctgaatgaacacagacccagaagtcctctactgtatgtgtgttg 683

                                                         
Query: 484 gtctggaaattgcaaactgggatttttttttatcatgaatttggga 529
           |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 684 gtctggaaattgcaaactgggatttttttt-atcatgaatttggga 728


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)