MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-406A24
Chromosome	13 (Build37)
Map Location	75,556,329 - 75,556,832
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042547, LOC666683, LOC547136, BC012278, LOC434490, Arts1, Cast, LOC622204, EG544954, Pcsk1
Downstream gene	LOC672443, LOC666764, LOC100042606, LOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276, Mctp1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042547 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins pseudo : _no_value

name	LOC666683 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC547136 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547136
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	BC012278 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235956 MGI:2385315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC434490 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins pseudo : _no_value

name	Arts1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80898 MGI:1933403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cast (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12380 MGI:1098236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 123 ESTs, 23 Proteins pseudo : _no_value

name	EG544954 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544954 MGI:3644479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 68 ESTs, 18 Proteins

name	Pcsk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18548 MGI:97511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672443 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672443
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC666764 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666764
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100042606 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042606
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100042986 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 811 ESTs, 6 Proteins

name	Ell2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192657 MGI:2183438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666786 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins pseudo : _no_value

name	Glrx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93692 MGI:2135625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhobtb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73296 MGI:1920546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666553 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins pseudo : _no_value

name	LOC622313 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 981 ESTs, 3 Proteins pseudo : _no_value

name	Spata9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75571 MGI:1922821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rfesd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218341 MGI:2145198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043008 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Gpr150 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238725 MGI:2441872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arsk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77041 MGI:1924291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AK129128 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218343 MGI:2679923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm276 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238726 MGI:2685122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 ESTs, 1 Protein

name	Mctp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78771 MGI:1926021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC012278 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122798 GeneID:235956 MGI:2385315
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC012278 transcript_id : NM_146231.1

name	Arts1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370051 GeneID:80898 MGI:1933403
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : type 1 tumor necrosis factor receptor shedding aminopeptidase regulator transcript_id : NM_030711.3

name	Cast (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364225 GeneID:12380 MGI:1098236
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpastatin transcript_id : NM_009817.2

name	EG544954 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395312 GeneID:544954 MGI:3644479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 68 ESTs, 17 Proteins product : predicted gene, EG544954, transcript variant 1 transcript_id : XM_619124.3

name	EG544954 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264396 GeneID:544954 MGI:3644479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 5 Proteins product : predicted gene, EG544954, transcript variant 2 transcript_id : XM_888940.3

name	Pcsk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129805 GeneID:18548 MGI:97511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proprotein convertase subtilisin/kexin type 1 transcript_id : NM_013628.2

name	LOC100042986 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264397 GeneID:100042986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 811 ESTs, 6 Proteins product : similar to ribosomal protein L37a transcript_id : XM_001479280.1

name	Ell2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256446 GeneID:192657 MGI:2183438
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation factor RNA polymerase II 2 transcript_id : NM_138953.2

name	Glrx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803264 GeneID:93692 MGI:2135625
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin transcript_id : NM_053108.3

name	Rhobtb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892620 GeneID:73296 MGI:1920546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho-related BTB domain containing 3 transcript_id : NM_028493.2

name	Spata9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349466 GeneID:75571 MGI:1922821
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated 9 transcript_id : NM_029343.2

name	Rfesd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922685 GeneID:218341 MGI:2145198
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rieske (Fe-S) domain containing transcript_id : NM_178916.4

name	Gpr150 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342021 GeneID:238725 MGI:2441872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 150 transcript_id : NM_175495.2

name	Arsk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803446 GeneID:77041 MGI:1924291
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arylsulfatase K transcript_id : NM_029847.3

name	AK129128 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486882 GeneID:218343 MGI:2679923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AK129128 transcript_id : NM_001081352.1

name	Gm276 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395344 GeneID:238726 MGI:2685122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 ESTs, 1 Protein product : gene model 276, (NCBI) transcript_id : XM_138722.5

name	Mctp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119964711 GeneID:78771 MGI:1926021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multiple C2 domains, transmembrane 1 transcript_id : NM_030174.2

name	BC012278 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122799 GeneID:235956 MGI:2385315
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC235956 protein_id : NP_666343.1

name	Arts1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507656 CCDS:CCDS26647.1 GeneID:80898 MGI:1933403
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0005788 - endoplasmic reticulum lumen [Evidence ISS]; GO:0005576 - extracellular region [Evidence ISS]; GO:0016021 - integral to membrane [Evidence ISS] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005151 - interleukin-1, Type II receptor binding [Evidence ISS]; GO:0005138 - interleukin-6 receptor binding [Evidence ISS]; GO:0004178 - leucyl aminopeptidase activity [Evidence ISS] [Evidence IDA]; GO:0004179 - membrane alanyl aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0004239 - methionyl aminopeptidase activity [Evidence IDA] [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005164 - tumor necrosis factor receptor binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence ISS] [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence ISS]; GO:0019885 - antigen processing and presentation of endogenous peptide antigen via MHC class I [Evidence ISS]; GO:0008217 - blood pressure regulation [Evidence ISS]; GO:0045444 - fat cell differentiation [Evidence ISS]; GO:0006509 - membrane protein ectodomain proteolysis [Evidence ISS]; GO:0045766 - positive regulation of angiogenesis [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0045088 - regulation of innate immune response [Evidence ISS] codon_start : 1 note : adipocyte-derived leucine aminopeptidase product : type 1 tumor necrosis factor receptor shedding aminopeptidase regulator protein_id : NP_109636.1

name	Cast (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563246 CCDS:CCDS26648.1 GeneID:12380 MGI:1098236
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0030161 - calpain inhibitor activity [Evidence ISS] [Evidence IEA]; GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030163 - protein catabolism [Evidence ISS] codon_start : 1 note : calpastatin type III product : calpastatin protein_id : NP_033947.1

name	EG544954 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63652391 GeneID:544954 MGI:3644479
definition	codon_start : 1 product : similar to heterogeneous nuclear ribonucleoprotein A1, isoform 1 protein_id : XP_619124.1

name	EG544954 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82951294 GeneID:544954 MGI:3644479
definition	codon_start : 1 product : similar to heterogeneous nuclear ribonucleoprotein A1, isoform 2 protein_id : XP_894033.1

name	Pcsk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305371 CCDS:CCDS26649.1 GeneID:18548 MGI:97511
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004285 - proprotein convertase 1 activity [Evidence IEA] codon_start : 1 note : prohormone convertase 1/3 product : proprotein convertase subtilisin/kexin type 1 protein_id : NP_038656.1

name	LOC100042986 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264398 GeneID:100042986
definition	codon_start : 1 product : similar to ribosomal protein L37a protein_id : XP_001479330.1

name	Ell2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256447 GeneID:192657 MGI:2183438
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0008159 - positive transcription elongation factor activity [Evidence ISS]; GO:0003746 - translation elongation factor activity [Evidence IEA] GO_process : GO:0006368 - RNA elongation from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : ELL-related RNA polymerase II, elongation factor; eleven-nineteen lysine-rich leukemia gene 2 product : elongation factor RNA polymerase II 2 protein_id : NP_620403.2

name	Glrx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981458 CCDS:CCDS26651.1 GeneID:93692 MGI:2135625
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0019153 - protein-disulfide reductase (glutathione) activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : glutaredoxin (thioltransferase) product : glutaredoxin 1 (thioltransferase) protein_id : NP_444338.2

name	Rhobtb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31745135 CCDS:CCDS26652.1 GeneID:73296 MGI:1920546
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : Rho-related BTB domain containing 3 protein_id : NP_082769.1

name	Spata9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21735467 CCDS:CCDS26653.1 GeneID:75571 MGI:1922821
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : spermatogenesis associated 9 protein_id : NP_083619.1

name	Rfesd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82775349 CCDS:CCDS26654.1 GeneID:218341 MGI:2145198
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Rieske (Fe-S) domain containing protein_id : NP_849247.2

name	Gpr150 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425246 CCDS:CCDS26655.1 GeneID:238725 MGI:2441872
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 150 protein_id : NP_780704.1

name	Arsk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313326 GeneID:77041 MGI:1924291
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : arylsulfatase K protein_id : NP_084123.1

name	AK129128 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486883 GeneID:218343 MGI:2679923
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC218343 protein_id : NP_001074821.1

name	Gm276 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395345 GeneID:238726 MGI:2685122
definition	codon_start : 1 product : hypothetical protein protein_id : XP_138722.5

name	LOC666683 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666683
definition	number : 1 pseudo : _no_value

name	LOC666683 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666683
definition	number : 2 pseudo : _no_value

name	LOC666683 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666683
definition	number : 3 pseudo : _no_value

name	LOC547136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547136
definition	number : 5 pseudo : _no_value

name	LOC547136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547136
definition	number : 4 pseudo : _no_value

name	LOC547136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547136
definition	number : 3 pseudo : _no_value

name	LOC547136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547136
definition	number : 2 pseudo : _no_value

name	LOC547136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547136
definition	number : 1 pseudo : _no_value

name	LOC672443 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672443
definition	number : 1 pseudo : _no_value

name	LOC666764 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666764
definition	number : 2 pseudo : _no_value

name	LOC666764 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666764
definition	number : 1 pseudo : _no_value

name	LOC100042606 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042606
definition	number : 2 pseudo : _no_value

name	LOC100042606 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042606
definition	number : 1 pseudo : _no_value

name	LOC100043008 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043008
definition	number : 1 pseudo : _no_value

name	LOC100042547 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264344 GeneID:100042547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to crooked legs CG14938-PB pseudo : _no_value transcript_id : XR_033686.1

name	LOC434490 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264345 GeneID:434490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins product : similar to stomatin-like protein 2 pseudo : _no_value transcript_id : XR_033696.1

name	LOC622204 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264395 GeneID:622204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 123 ESTs, 23 Proteins product : similar to hCG1793591 pseudo : _no_value transcript_id : XR_034124.1

name	LOC666786 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264399 GeneID:666786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034140.1

name	LOC666553 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264400 GeneID:666553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins product : similar to WD repeat domain 77 pseudo : _no_value transcript_id : XR_034146.1

name	LOC622313 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264401 GeneID:622313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 981 ESTs, 3 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_034149.1

clone name	MSMg01-370K11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-122P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517D15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-156E06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-055P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177O19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-519E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-074D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162D23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-406A24.T7 (MSMg01no406_a24.b1)	MSMg01-406A24.TJ (MSMg01no406_a24.g1)
ACC	AG504346	AG504347
length	736	754
length of high quality (start - end)	597 (73 - 669)	390 (79 - 468)
definition	CHROMAT_FILE: MSMg01no406_a24.b1 PHD_FILE: MSMg01no406_a24.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:21:15 2005	CHROMAT_FILE: MSMg01no406_a24.g1 PHD_FILE: MSMg01no406_a24.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:21:15 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CCCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG CGGAATTCTCAGTTATTCCCCTGGCTATATCCCAGTAAACTGAACTTCTG TGGTTCCTTCAATATTCTTGTCTCCTAGATAGGCAGAAAAATAGACAAAT CTGGGGTTCCCCTACTACACTTTCATGAGCCTTAAATGACTTGGACAATC AGTAATCAAGTCCTTTCAATTTGAATTTAATTTTTCAAATCCTCAAACTC CATTTCTGTTCTTCATTTTTATAGCCAACCTTCTAACTTCTCCATTTCCC TGTCAATCTGACCTTTATGCTTTCTGAAATATGCGTTTGATCCTCTCATT CGTCCAATTAAAAGTTTCTTCTCCATGAAAGTGGGGAAAATCCTCGAAGA TATGGGCAGAGGGAAAAATTCCTGAGCTGAACAGCAATGGCCTGTGCTGT AAGATCGAGAATTGACAAGTGGGAACTCATAAAATTGCAAAGATTCTGCA AGGCAAAAGAAACTGTCAATAAGACAAAAAGGCCACCAACAGATTTGGAA AGGATCTTTACCAATCCAAAATCCAATAGGGGACTAATATCCAATATATA TAAAAATCTCAAGAAATTGGATTCCAGAAAACCAAATAATCCTATTAAAA ATGTGGTACAGAGATAAACAAAGAATTCTCACCTGAGGAATACCGAATGG CTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAA	NCCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTAT CATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGA TGATCATGTGATTTTTGTCTTTTAGTTTGTTTATATAATGGATTACATTG ATGGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTAC TTGGTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGA GAATTTTATTGAGGATTTTTGCGTCGATATTCATAAGAGAAATTGGTCTG AAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAAT AGTGGATTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGT GAAATAGTTTGTGCAGAATTGGAATTAGATCTTCTTTGAAGGTCTGATAG AACTCTGCACTAAACCCATCTGGCCCTGGGCTTTTTTTGGTTGGGAGACT ATTATTAACTGCTTCTATTTCTTTAGGTGATATGCGACTGTTTAGATTGT CCAACTTGATCCTGTATCCCACTTTGTTATCCCGCTATCTGCCCCTCAAA TTTTTTCCTTTTCTTCCCCCTTTTTCTCCCCCTTTCGTTGTTTTATTTTT CTTTTTTCTCCTCCCCCTCCTCGCTTTTCCTTTTTTTTCCTCACCCCCTC CCTG
quality values	Open. Hide. 6 8 8 6 8 8 8 8 8 8 8 9 9 15 9 9 9 8 13 10 10 10 11 13 15 24 28 33 22 17 12 12 12 19 15 9 9 9 11 9 9 9 12 9 9 10 11 10 12 13 26 26 29 23 23 28 32 33 37 37 37 23 12 9 7 7 8 8 11 10 12 18 20 23 23 28 34 37 48 48 36 36 36 36 36 36 50 53 57 50 50 53 57 57 43 43 43 39 39 43 42 57 57 57 57 57 57 48 48 50 50 48 54 57 57 57 57 57 57 54 54 57 57 57 46 46 37 57 57 57 68 68 68 68 68 68 68 59 50 46 50 50 50 50 54 54 54 42 42 42 47 47 57 57 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 52 52 52 57 57 52 52 52 57 59 57 57 57 57 57 57 68 59 57 57 68 68 68 57 57 57 57 57 59 57 57 57 57 57 57 57 59 57 57 59 59 57 57 57 57 57 57 68 57 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 57 57 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 52 52 52 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 44 43 26 26 20 39 20 26 20 39 39 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 57 57 57 59 57 57 57 57 57 57 57 52 52 52 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 59 59 59 57 57 57 57 52 43 43 35 35 35 44 44 59 43 38 38 57 50 52 52 52 52 52 52 57 52 50 50 37 37 43 50 52 54 54 50 50 43 32 27 32 43 43 52 52 43 43 43 46 46 48 50 50 50 43 43 43 50 57 43 39 35 35 39 43 59 47 54 54 57 57 48 48 47 44 44 43 43 44 43 43 44 46 48 48 48 41 39 30 30 30 28 32 28 31 23 28 28 39 39 46 42 42 32 34 28 28 28 33 34 36 36 35 39 39 42 32 30 35 40 47 48 48 48 48 43 43 43 43 43 43 43 43 37 31 26 19 19 12 13 10 11 12 25 28 20 20 20 23 31 32 30 25 32 37 39 39 39 40 39 39 35 32 25 24 17 15 16 21 32 33 37 39 43 39 39 39 30 30 32 31 29 24 19 19 19 31 32 37 36 32 31 32 24 26 14 12 12 18 18 28 26 25 30 28 22 22 24 28 34 22 21 13 13 13 21 26 28 32 24 18 17 30 30 23 18 9 9 9 23 23 34 23 23 23 30 30 37 30 24 16 14 12 12 14 24 25 23 19 19 14 19 28 23 23 23 32 23 24 15 14 18 12 10 9 9 9 9 22 28 28 22 14 12 12 18 25 15 20 31 18 18 17 17 17 25 27 28 22 22 30 21 25 14 9 10 10 9 10 14 20 19 24 16 10 11 12 12 17 13	Open. Hide. 0 3 6 6 6 6 8 8 10 7 6 8 8 9 9 9 9 9 10 27 19 32 28 28 19 17 23 20 19 25 29 23 19 8 8 7 7 7 7 7 9 8 8 8 19 21 28 22 19 26 27 27 27 22 28 33 33 41 39 39 25 17 12 9 9 9 9 12 12 29 34 34 21 12 16 18 27 24 41 37 37 37 37 37 37 59 29 29 24 22 22 30 39 39 39 40 41 42 44 41 47 47 47 47 57 50 50 53 50 50 50 53 53 53 36 36 33 33 37 37 41 37 37 37 37 31 32 37 37 37 47 47 50 50 50 50 48 48 50 48 48 50 57 57 57 57 57 36 36 25 31 29 34 34 32 42 48 50 42 40 41 41 41 51 57 68 68 68 68 68 68 68 68 68 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 57 57 57 57 57 57 47 47 47 50 50 50 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 54 59 59 59 59 59 59 59 52 59 59 59 59 59 57 68 68 68 68 57 57 54 54 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 59 59 68 68 68 59 59 57 57 52 57 57 59 57 57 57 57 57 68 68 59 59 57 57 57 59 59 62 68 68 68 62 68 68 68 68 68 62 62 62 68 68 68 68 68 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 39 41 62 62 62 68 68 62 62 62 62 62 62 62 59 57 57 57 57 57 57 68 68 68 68 68 68 68 59 59 59 59 59 57 57 52 57 57 57 59 68 57 57 57 57 57 57 59 59 59 59 57 57 57 57 44 43 32 43 35 43 43 57 52 52 57 57 57 57 57 43 44 43 37 37 35 42 35 35 35 44 44 57 57 59 59 59 59 59 54 57 57 59 57 57 57 57 57 57 57 57 48 48 48 57 59 57 57 59 57 68 57 57 57 57 57 57 57 59 59 57 44 44 42 40 42 37 26 24 18 15 18 26 26 32 16 19 17 26 22 23 11 11 15 27 25 43 43 43 37 42 34 37 33 24 20 21 21 37 42 36 34 30 17 17 19 25 27 32 26 22 15 11 11 22 16 11 11 16 16 32 30 39 37 37 14 7 6 6 8 10 13 12 12 19 25 31 30 33 33 33 37 32 25 25 28 24 14 13 12 12 18 16 19 15 19 19 21 14 13 13 13 11 11 12 23 28 30 15 10 10 10 17 15 28 30 36 24 25 12 12 12 11 11 12 9 9 10 9 7 8 10 15 15 20 25 19 16 7 7 8 8 8 8 10 14 8 8 8 8 10 10 10 11 11 19 7 8 7 6 8 8 8 8 6 6 8 10 15 10 9 8 8 6 6 6 6 8 9 9 8 8 8 8 8 8 8 10 11 10 9 9 9 9 9 8 15 13 14 10 10 11 19 19 13 15 10 10 10 10 9 10 10 12 14 16 16 13 12 11 11 11 11 15 14 28 28 22 15 12 11 11 8 8 6 6 10 10 9 10 10 15 12 17 10 10 12 14 21 17 13 10 10 8 8 8 8 12 17 15 9 9 10 8 8 9 8 8 8 8 8 9 8 9 11 15 15 15 15 14 12 15 19 15 8 8 6 6 6 10 18 20 20 13 11 10 8 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no406_a24.b1 MSMg01no406_a24.b1 CHROMAT_FILE:
MSMg01no406_a24.b1 PHD_FILE: MSMg01no406_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:15 2005
         (597 letters)



>mm_chr13_75556329_75557325
          Length = 997

 Score =  951 bits (492), Expect = 0.0
 Identities = 501/504 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggctatatcccagtaaactgaacttctgtggttccttcaatattcttgtctcctagatag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggctatatcccagtaaactgaacttctgtggttccttcaatattcttgtctcctagatag 445

                                                                       
Query: 61  gcagaaaaatagacaaatctggggttcccctactacactttcatgagccttaaatgactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcagaaaaatagacaaatctggggttcccctactacactttcatgagccttaaatgactt 385

                                                                       
Query: 121 ggacaatcagtaatcaagtcctttcaatttgaatttaatttttcaaatcctcaaactcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggacaatcagtaatcaagtcctttcaatttgaatttaatttttcaaatcctcaaactcca 325

                                                                       
Query: 181 tttctgttcttcatttttatagccaaccttctaacttctccatttccctgtcaatctgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttctgttcttcatttttatagccaaccttctaacttctccatttccctgtcaatctgac 265

                                                                       
Query: 241 ctttatgctttctgaaatatgcgtttgatcctctcattcgtccaattaaaagtttcttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttatgctttctgaaatatgcgtttgatcctctcattcgtccaattaaaagtttcttct 205

                                                                       
Query: 301 ccatgaaagtggggaaaatcctcgaagatatgggcagagggaaaaattcctgagctgaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ccatgaaagtggggaaaatcctcgaagatatgggcagagggaaaaattcctgagctgaac 145

                                                                       
Query: 361 agcaatggcctgtgctgtaagatcgagaattgacaagtgggaactcataaaattgcaaag 420
           || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 144 agtaatggcctgtgctgtaagatcgagaattgacaaatgggaactcataaaattgcaaag 85

                                                                       
Query: 421 attctgcaaggcaaaagaaactgtcaataagacaaaaaggccaccaacagatttggaaag 480
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  attctgcaaggcaaaagacactgtcaataagacaaaaaggccaccaacagatttggaaag 25

                                   
Query: 481 gatctttaccaatccaaaatccaa 504
           ||||||||||||||||||||||||
Sbjct: 24  gatctttaccaatccaaaatccaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space:   579369
Effective search space used:   579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information