Query= MSMg01no414_d05.b1 MSMg01no414_d05.b1 CHROMAT_FILE:
MSMg01no414_d05.b1 PHD_FILE: MSMg01no414_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:09 2005
(452 letters)
>mm_chr13_63879871_63880722
Length = 852
Score = 859 bits (444), Expect = 0.0
Identities = 450/452 (99%)
Strand = Plus / Minus
Query: 1 gcatcagcatctaatgcattaccatggacaaactctgaaaatctaaataattcacatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gcatcagcatctaatgcattaccatggacaaactctgaaaatctaaataattcacatgca 406
Query: 61 cactgtgcctgacacgatgtcacagcttatcatgttactaatgaagtaataataagccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cactgtgcctgacacgatgtcacagcttatcatgttactaatgaagtaataataagccat 346
Query: 121 tctttcagctcctgaccaagtgtccacatctaagaaaactagcccatttctctggacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tctttcagctcctgaccaagtgtccacatctaagaaaactagcccatttctctggacttt 286
Query: 181 ggtttccatatttctttttattgtccccaaagtgggctccaaaataaagatttgagggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggtttccatatttctttttattgtccccaaagtgggctccaaaataaagatttgagggta 226
Query: 241 tgatgtttacttgatatgtttggggagtggtgtgctataggcagcttgcactggctgaga 300
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgatgtttacttgagaggtttggggagtggtgtgctataggcagcttgcactggctgaga 166
Query: 301 aggcaaactataggtcctcttcccacttccattacagggttaccccattaggagattaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aggcaaactataggtcctcttcccacttccattacagggttaccccattaggagattaaa 106
Query: 361 ataggcagtggagaaagtacttacactatggaaatcagcatctactaatctagtctgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ataggcagtggagaaagtacttacactatggaaatcagcatctactaatctagtctgctt 46
Query: 421 ttgctttgttgtttttctttgtttgcctgttc 452
||||||||||||||||||||||||||||||||
Sbjct: 45 ttgctttgttgtttttctttgtttgcctgttc 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_d05.g1 MSMg01no414_d05.g1 CHROMAT_FILE:
MSMg01no414_d05.g1 PHD_FILE: MSMg01no414_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:09 2005
(249 letters)
>mm_chr13_63762811_63763461
Length = 651
Score = 466 bits (241), Expect = e-136
Identities = 248/251 (98%), Gaps = 2/251 (0%)
Strand = Plus / Plus
Query: 1 tcagttctttgagctacagtacatccag--tgaatcataattaaaacaccttcaacccac 58
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tcagttctttgagctacagtacatccaaattgaatcataattaaaacaccttcaacccac 260
Query: 59 agggttgccatttttccaggctgccagaatatatgaatgtcctgaatgagcaacttgagt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggttgccatttttccaggctgccagaatatatgaatgtcctgaatgagcaacttgagt 320
Query: 119 gaatacatcaacagtgctgaaagaagataagcattaggttcttactagccttccttaaaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatacatcaacagtgctgaaagaagataagcattaggttcttactagccttccttaaaa 380
Query: 179 gtcaccattcattttctaatggtggtgaagcatgcacacattggcaaatttgaagtcact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcaccattcattttctaatggtggtgaagcatgcacacattggcaaatttgaagtcact 440
Query: 239 gatggtcacag 249
|||||||||||
Sbjct: 441 gatggtcacag 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 651
Length adjustment: 9
Effective length of query: 240
Effective length of database: 642
Effective search space: 154080
Effective search space used: 154080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
