CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCCATTTCCCTCACTCTCAGCCTCTGGTAGTCCCCACTCTGATTTCT
CTATATGTATTCCTAGATAAGGGGGAATGATAGAAACAGGAGGCCAGAAA
CTAGGCAGGCTGTCTTAGGGCCAGGGACCTTGATTCTTGTCAGAAACCAG
GAATGTCCTTTGCTCTGTCCAGAGATGCCAGAAGCGATTGAGGATCTGGT
CTTGGTTTTGGTTTCTTGTCACCTTTCTTGTGCACAGCTGCCTGGGAGCT
ACAGTGAGGGTGTGACTGTATCTCTAGTCCGGATGACGCCACCATCCAGT
TTGCACATTTCAGTTGTTGTGATGAATGGGGCTATGAACACAGGTATACA
TCACACCTGCTCTTTATCATGGCATTTTCAAACACACACGAACGTAGCAT
GCATAATATAAATGGACCCATGTTCTCAAGATCAACCCCCAGTCCCAGGT
CTCCAGATTCTATGGATGCAGAGATGCCTCAGTCCCTGATGCTCGCTGGC
AGGTAAGTTCCCGTGTGGATGAGAATTGACCCCCACTGTGTACAGTCTTT
GGGTCTCAACCTCCTATCTCCCGTATTCACTAAATTCTCAAAGCTCCTCC
TCCTCTTATTTTCACTCCGATTTGCGTATCCCATTTCTTTTACCTCACAT
TTATTTTGGCCTTGCCCCTTCTCCTGTTCTCAATTCTCAATTCTTTTTTT
TTCTCTTTGTTCTCTTTTTTTTGTTCCTATTTAT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTAGCCCAGGCTGTCCTGGAACTC
AAGAGATTCGCCTGCCTCTGCCTCCCAAGTGCTGGGGCTAAAGGTGTGTG
CTGCCACCACCCAGCTAAGAGCTTCTTCTTTTTTGAAGTGGGAAGACCCA
CTTTTAATCTGGATCTTTTGAGTTGGCGAGATCTCCCTTTAGTCTGCATT
CTACCTTCTGGTGGCAGCCCATAGAACAGACATGGAAGAAGGAAGCTCTT
GTTCTCTACCTGCTTGCCCTCACTCTCACTAGCCAGTCCATCCCTTCACT
GGCATGAGAGCAGAGCCCACTTCTTTGGGATTCTGGTATATACTGGTATA
TACTGAAGACCAGCTGAGGAAGCCAGCATTGTGGACTGAACAAGTTCTAC
ATTCTTAGGACTTGTATTGGTAGACAGCCATTGTTGGATCACAGCCTGGA
ATGAGTTCCTGTGTGCGTGTGTGTGTGTGTGTCTATGTATGCATGCATAT
ATATTCCCATGATATCCTTTTCTCCAGCAAACCCTTAATCCTGACTACCA
TTTATGCTGCTTGTCCCGACTTTTTAATGATTGCTCTGTTTTGTGTTCCT
ATGGTTCCCTTTGTGCCTTTACTTTTCAGTTCTTTCGATTATTATTTCTT
TACTATTGTTCGACTCTCTCATCCCCCCGTCTCTACTCCTTTCACTTTTC
TCGTCTCTCCACTCTCTCTTATCTTTACGCTCCCTTTTCTTT

Query= MSMg01no414_l04.b1 MSMg01no414_l04.b1 CHROMAT_FILE:
MSMg01no414_l04.b1 PHD_FILE: MSMg01no414_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:49 2005
         (459 letters)



>mm_chr13_114869253_114870111
          Length = 859

 Score =  864 bits (447), Expect = 0.0
 Identities = 453/455 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccatttccctcactctcagcctctggtagtccccactctgatttctctatatg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gaattctccatttccctcactctcagcctctggtagtccccactctgatttctctatatg 600

                                                                       
Query: 65  tattcctagataagggggaatgatagaaacaggaggccagaaactaggcaggctgtctta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tattcctagataagggggaatgatagaaacaggaggccagaaactaggcaggctgtctta 540

                                                                       
Query: 125 gggccagggaccttgattcttgtcagaaaccaggaatgtcctttgctctgtccagagatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gggccagggaccttgattcttgtcagaaaccaggaatgtcctttgctctgtccagagatg 480

                                                                       
Query: 185 ccagaagcgattgaggatctggtcttggttttggtttcttgtcacctttcttgtgcacag 244
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 479 ccagaagcgattgaggatctggtcttggttttggtttcttgtcatctttcttgtgcacag 420

                                                                       
Query: 245 ctgcctgggagctacagtgagggtgtgactgtatctctagtccggatgacgccaccatcc 304
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 419 ctgcctgggagctacagtgagggtgtgaccgtatctctagtccggatgacgccaccatcc 360

                                                                       
Query: 305 agtttgcacatttcagttgttgtgatgaatggggctatgaacacaggtatacatcacacc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agtttgcacatttcagttgttgtgatgaatggggctatgaacacaggtatacatcacacc 300

                                                                       
Query: 365 tgctctttatcatggcattttcaaacacacacgaacgtagcatgcataatataaatggac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgctctttatcatggcattttcaaacacacacgaacgtagcatgcataatataaatggac 240

                                              
Query: 425 ccatgttctcaagatcaacccccagtcccaggtct 459
           |||||||||||||||||||||||||||||||||||
Sbjct: 239 ccatgttctcaagatcaacccccagtcccaggtct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)