Query= MSMg01no414_l22.b1 MSMg01no414_l22.b1 CHROMAT_FILE:
MSMg01no414_l22.b1 PHD_FILE: MSMg01no414_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:53 2005
(496 letters)
>mm_chr13_104661146_104662041
Length = 896
Score = 897 bits (464), Expect = 0.0
Identities = 482/488 (98%)
Strand = Plus / Plus
Query: 5 gaattctctagaggatgccaaaaacattctatgtaagtactggtaatgctgtaataaaat 64
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 205 gaattctctagaggatggtaaaaacattctatgtaagtactagtaatgctgtaataaaat 264
Query: 65 tagaactatgctaaattctacaaaaatacacaaagtaagagctctttttagttttcaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagaactatgctaaattctacaaaaatacacaaagtaagagctctttttagttttcaaaa 324
Query: 125 ctctattattccttcccttttctaaacttcatattaatactttttaagtactaggttttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctctattattccttcccttttctaaacttcatattaatactttttaagtactaggttttg 384
Query: 185 ttcaggtacctcaaattcaaatacatctttattttattattcagcaaaaacataccaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaggtacctcaaattcaaatacatctttattttattattcagcaaaaacataccaaac 444
Query: 245 acaaattggaagacatgttatgaactacaaatacctggactttatcaacagttaaaatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acaaattggaagacatgttatgaactacaaatacctggactttatcaacagttaaaatgt 504
Query: 305 agtgagtggtccggggagatggctcagtcagtaaagtgcttacagcttaagaatgtgggc 364
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtgagtggtctggggagatggctcagtcagtaaagtgcttacagcttaagaatgtgggc 564
Query: 365 ctgaattttgatctccagcattcatgtagagtagctgggcatggagctatatgcctctaa 424
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 565 ctgaattttgatctccagcattcatgtagagtagctgggcatggaactacatgcctctaa 624
Query: 425 ccccagctctggggaggtagagacaggaagaagctaaaggcttcctaactagctatttta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccccagctctggggaggtagagacaggaagaagctaaaggcttcctaactagctatttta 684
Query: 485 gccaaatc 492
||||||||
Sbjct: 685 gccaaatc 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_l22.g1 MSMg01no414_l22.g1 CHROMAT_FILE:
MSMg01no414_l22.g1 PHD_FILE: MSMg01no414_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:53 2005
(483 letters)
>mm_chr13_104878758_104879641
Length = 884
Score = 866 bits (448), Expect = 0.0
Identities = 470/484 (97%), Gaps = 13/484 (2%)
Strand = Plus / Minus
Query: 1 acctaatagtaggtactgtgccagatactccacaggggccttaattttaatgtgagggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 acctaatagtaggtactgtgccagatactccacaggggccttaattttaatgtgagggct 530
Query: 61 tttttgcatt-aaaaaaaaatcctttaagaaaaggctgtttttattttgaaaaatttcac 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tttttgcattaaaaaaaaaatcctttaagaaaaggctgtttttattttgaaaaatttcac 470
Query: 120 taccaaatcatataggtcgagtaagcagctaacatgcaactcctaaaccatcacagagct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 taccaaatcatataggtcgagtaagcagctaacatgcaactcctaaaccatcacagagct 410
Query: 180 ttccgttagaaagagccactgtgagtaatgtttctgcactacactgtcctctgtaaatgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttccgttagaaagagccactgtgagtaatgtttctgcactacactgtcctctgtaaatgc 350
Query: 240 tgttcagagtgaatgtatgatgctatagatcagttctgctagctgtcatctatagcaaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgttcagagtgaatgtatgatgctatagatcagttctgctagctgtcatctatagcaaat 290
Query: 300 gatagtaaacacattccttcagacaagtgatgtaaaagagaagaactaaactggggttct 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 289 gatagtaaacacattccttcagacaagtgatgtaaaagagaagaaccaaactggggttct 230
Query: 360 ggctataaagtgagagatgaacttttctttttctttctttctttctttctttctttcttt 419
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 229 ggctataaagtgagagatgaacttttctt--------tttctttctttctttctttcttt 178
Query: 420 ctttctttctttctttctttctttctttctttttttaaaaaaagatttatttatttatta 479
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 177 ctttctttctttctttctttctttctttctttt----aaaaaagatttatttatttatta 122
Query: 480 tatg 483
||||
Sbjct: 121 tatg 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 884
Length adjustment: 10
Effective length of query: 473
Effective length of database: 874
Effective search space: 413402
Effective search space used: 413402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
