ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAA
TTCCAAATGTTATATAATCACAGAAACCATCTGCAGCTGGTAAAATCACG
CCTCTGCTAGAGCACGAGGCAAATCACAGTCAGCTGCTGTGGACAGACTG
AAGCAGTCCTGTACCCCACACCTGGGATTAAATTGAAAACACATTCCTAT
TTCTACATTTTTAAAAAGAAACCAAAATGTTCACCGAAGACGTCTGAGGT
TTTTAGCCCCGCCTCACTTCCTGTCCCTTTTCTGCTTCCTGATTGGGCAG
CAGTAACCACACTCACCATGTTCCTGCTGCCCTGCCTTCTCAGCCATGAT
AGACTGCACCTTCACGGCATACATCAAAACAAACATCCCCTTTAATTGCT
TTTTATCAAGCAACCAAAAAAGTAAACACTATGCCTCCCTTCCTCTTTTT
TTTTTAAATTTTATTTATTTATTTATTTTTATATATACGTGTACACTGTA
GCTATACAGATGGTTGTGAGCCATCATGTGGTTGGTGGGAATTGAACTCA
GGACCTCTGTTTGCTCCAGCCCAAAGATTTATTTGTTATATTTAAGTAGC
TGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTATGTATGGTTG
TAAACCACCATGCAGTTGCTGGGAATTGAACTCACCACCCTTCAAAGACC
CTCAGTGCTCTTAACCGTTGAAGCTTTCTTCCGGCCGCCTCCCTTCCCCT
TAATA

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACAGAGTTCCACCTGCCTTTGTG
CTGGGACTAAAGGCCTAACTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTGTGAGACAGGGTT
TCTCTGTATACCTCTGGCTGTCCTGGAACTCACTTTGCAGACCAGGCTGG
CCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAA
AGGCATGGGCCACCAAGCCCATTTTTTTCTAACTTTTCATATGAATATCT
TTGTATACTTGTTAAAGCACTTGGACCTTAAGGAAGGACACAGTGGTGAA
CAGTTTTAATCTCAGCTCTCAAGAGGCAGAAGCAGGCAGATTTTATATAT
ATATATATATATATATATATATATATATATATATATACACACACACATAT
ATATATGTATATATATGTGTGTGTGTGTGTGTATTAAAAACTTAACCTAC
CTATACTATAACGTGGATCATAATAGTCTTTTACTAGTTCTCCTCTTTCA
GATGAAAATGTGGTCTTAAAGGGTGTTTTCTTGTTTCTGTCCTGGCCGCT
TGCTCATTCTTTTTTTGTTTTTTTGCGGTCAGTCATATTTATTTTTGGTC
GTTTCGTTTGCCTTTCCATCTCTTTTTCCTGTATTTTCTTCTCTTT

Query= MSMg01no424_j18.g1 MSMg01no424_j18.g1 CHROMAT_FILE:
MSMg01no424_j18.g1 PHD_FILE: MSMg01no424_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:36 2005
         (445 letters)



>mm_chr13_44821419_44822263
          Length = 845

 Score =  671 bits (347), Expect = 0.0
 Identities = 393/425 (92%), Gaps = 30/425 (7%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagagttccacctgcctttgtgctgggactaaaggcctaacttttctttctttctttct 60
           |||||||||||||||||||||||||||||||||||||||||||        |||||||||
Sbjct: 809 acagagttccacctgcctttgtgctgggactaaaggcctaact--------tttctttct 758

                                                                       
Query: 61  ttctttctttctttctttctttctttctttctttctttctttctttttttgtgagacagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ttctttctttctttctttctttctttctttctttctttctttctttttttgtgagacagg 698

                                                                       
Query: 121 gtttctctgtatacctctggctgtcctggaactcactttgcagaccaggctggccttgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gtttctctgtatacctctggctgtcctggaactcactttgcagaccaggctggccttgaa 638

                                                                       
Query: 181 ctcagaaatccacctgcctctgcctcccgagtgctgggattaaaggcatgggccaccaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ctcagaaatccacctgcctctgcctcccgagtgctgggattaaaggcatgggccaccaag 578

                                                                       
Query: 241 ccca--ttttttt----ctaacttttcatatgaatatctttgtatacttgttaaagcact 294
           ||||        |    |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 577 cccagc------taggcctaacttttcatatgaatatctttgtatacttgttaaaacact 524

                                                                       
Query: 295 tggaccttaaggaaggacacagtggtgaacagttttaatctcagctctcaagaggcagaa 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tggaccttaaggaaggacacagtggtgaacagttttaatctcagctctcaagaggcagaa 464

                                                                       
Query: 355 gcaggcagattttatatatatatat----------atatatatatatatatatatatata 404
           |||||||||||||||||||||||||          ||| |||||||||||||||||||||
Sbjct: 463 gcaggcagattttatatatatatatacacacacacatacatatatatatatatatatata 404

                
Query: 405 tatat 409
           |||||
Sbjct: 403 tatat 399



 Score = 91.6 bits (47), Expect = 1e-22
 Identities = 99/117 (84%), Gaps = 8/117 (6%)
 Strand = Plus / Minus

                                                                       
Query: 104 tttttttgtgagacagggtttctctgtata-cctctggctgtcctggaactcactttgca 162
           ||||||| |||||||  |||||| ||| || ||  ||||||||||||||||  |||||||
Sbjct: 226 ttttttt-tgagaca--gtttctttgtgtagcc-atggctgtcctggaacttgctttgca 171

                                                                    
Query: 163 gaccaggctggccttgaactc-agaaatccacctgcctct-gcctcccgagtgctgg 217
           |||||||||||||||||||||  ||||||  | ||||||| ||| ||||||| ||||
Sbjct: 170 gaccaggctggccttgaactcgcgaaatctgcttgcctctggcc-cccgagtactgg 115


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 143
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 2
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space:   363225
Effective search space used:   363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)