XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTC
TTGTCATATTCCTTTTGAAGTTTTGTCCTGGAGAACTGTACTTAATATCC
TAACTCAGTGTGGTGGCGGTGACAACAAGACGAAGGACCAGAGACCACGT
GGTTTGGTCAAGATTTGAGGAGATTGGTAAGGGCATCTGAGTCCACTTCT
GCCCCATTTCCATTTCCAGTTGTTCCATTCAGGGGTCCACTGTGTGATCC
TTCTCGACGGCAGGTATGGCTTCGTTAAGCTCTAGAGAACACTGGAAATA
ATAAGCTATGGCCCAAACTGTGTTGAAGCTGACAGAATTAGTCTGACTAA
GGCAGCTGTGCTGCTGACAAAAAATCAGCTGTTGGTCACTATGACAAATA
TTTCAGAAAACCAGCTTATGAAGTGGGTCACAGTTCTGTGATGTCCTAGT
CTACCCTTGTCTTCTCCTCTCCTAACTAGAAAGCAAGTGAAAATGAGGCA
AGAGCTGAGGTTCTACTATCTCTTTCAAAGGTACCCCCCCACACACACAC
ACAATGACCTACAGACCTCCCTCTAGATGCCATCTCTAGAAGCTTCTGGC
ACTTTCCCATAGTGTCAGGCTGAGAACATGCCTTTAAACATGGGGTTTTA
GGGGAAGTCCAGACCCACCTGTATCACGCAATGGGAATGATATCCCAATC
TCTGGTAGGGAGAAGGCCCCACCAATAAGTCTTACT

GATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTATCATGGATGG
GTGTTGGATCTTGTCGAATGTTTTTTCCGCATCTAATGAGATGACCATAT
ATATGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGA
TTTCCGTATATTAAACCATCCCTGCATCCGTGGAATAAAACCTATTAGGT
CAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATT
TTATTGAGTATTTTTTCATCTATATTCATAAGAAAAAATGGTCTGAAGTG
CTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATTGTGG
CTTCATAGAATGAGTTGGGTAGAGTTCCCTCTAATTCTATTTTATGGAAT
AGTTTGTGCAGAACAGGGATTAGATCTTCTTTGAAGGTCTGATAGAACTC
TGCACTAAACCCATCTGGTCCTGTGCGTTTTTTTTTTTTTTTTTTTTTTT
TGGGGCGGGAAACAATTAGGACGGCTTTTATTTCTTTATGGGAAAGGTAC
GGTTTAAACATTACTCTGCCCTCATTTTTTTTTTACCTCGCATCCTTTTC
AAATTTGCATTTTCCCACTGTTCCCCCTTTTTTAACCACCCCTCTTTTTT
GTATTTTATTTTTTTTTTTTTTTTTCCCTCT

Query= MSMg01no425_k23.b1 MSMg01no425_k23.b1 CHROMAT_FILE:
MSMg01no425_k23.b1 PHD_FILE: MSMg01no425_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:58 2005
         (516 letters)



>mm_chr13_35154600_35155515
          Length = 916

 Score =  944 bits (488), Expect = 0.0
 Identities = 494/496 (99%)
 Strand = Plus / Plus

                                                                       
Query: 16  gaattcttgtcatattccttttgaagttttgtcctggagaactgtacttaatatcctaac 75
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcttgtcataacccttttgaagttttgtcctggagaactgtacttaatatcctaac 275

                                                                       
Query: 76  tcagtgtggtggcggtgacaacaagacgaaggaccagagaccacgtggtttggtcaagat 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tcagtgtggtggcggtgacaacaagacgaaggaccagagaccacgtggtttggtcaagat 335

                                                                       
Query: 136 ttgaggagattggtaagggcatctgagtccacttctgccccatttccatttccagttgtt 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttgaggagattggtaagggcatctgagtccacttctgccccatttccatttccagttgtt 395

                                                                       
Query: 196 ccattcaggggtccactgtgtgatccttctcgacggcaggtatggcttcgttaagctcta 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ccattcaggggtccactgtgtgatccttctcgacggcaggtatggcttcgttaagctcta 455

                                                                       
Query: 256 gagaacactggaaataataagctatggcccaaactgtgttgaagctgacagaattagtct 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gagaacactggaaataataagctatggcccaaactgtgttgaagctgacagaattagtct 515

                                                                       
Query: 316 gactaaggcagctgtgctgctgacaaaaaatcagctgttggtcactatgacaaatatttc 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gactaaggcagctgtgctgctgacaaaaaatcagctgttggtcactatgacaaatatttc 575

                                                                       
Query: 376 agaaaaccagcttatgaagtgggtcacagttctgtgatgtcctagtctacccttgtcttc 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agaaaaccagcttatgaagtgggtcacagttctgtgatgtcctagtctacccttgtcttc 635

                                                                       
Query: 436 tcctctcctaactagaaagcaagtgaaaatgaggcaagagctgaggttctactatctctt 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcctctcctaactagaaagcaagtgaaaatgaggcaagagctgaggttctactatctctt 695

                           
Query: 496 tcaaaggtaccccccc 511
           ||||||||||||||||
Sbjct: 696 tcaaaggtaccccccc 711


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space:   458436
Effective search space used:   458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)