Query= MSMg01no425_o22.b1 MSMg01no425_o22.b1 CHROMAT_FILE:
MSMg01no425_o22.b1 PHD_FILE: MSMg01no425_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:17 2005
(222 letters)
>mm_chr13_47261459_47262080
Length = 622
Score = 306 bits (158), Expect = 9e-88
Identities = 187/204 (91%), Gaps = 13/204 (6%)
Strand = Plus / Plus
Query: 1 ggtcatggatgtacatcacatagttcttgggaacaataggcttgtttcgcaatggccgtg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ggtcatggatgtacatcacatagttcttgggaacaatagtcttgtttcgcaatggccgtg 260
Query: 61 ctgagaatgttaccaagcctttggcgccattgctctttttgaaggttgggtggtttgcaa 120
||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 261 ctgagaatgttaccaagtctttggcgccgttgctctttttgaaggttgggtggt------ 314
Query: 121 gcaggtccagcaccgcttgccagccgagatgctattgtcagtggagcacacaca-gagat 179
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 315 ------ccagcaccgcttgccagctgagatgctattgtcagtggagcacacacaagagat 368
Query: 180 tgtggctttacagcccacgaggaa 203
||||||||||||||||||||||||
Sbjct: 369 tgtggctttacagcccacgaggaa 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no425_o22.g1 MSMg01no425_o22.g1 CHROMAT_FILE:
MSMg01no425_o22.g1 PHD_FILE: MSMg01no425_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:17 2005
(203 letters)
>mm_chr13_47433750_47434352
Length = 603
Score = 377 bits (195), Expect = e-109
Identities = 201/203 (99%)
Strand = Plus / Minus
Query: 1 ataccagggatcctatcactgcatcctttgaaaagcattggtggggaaggagggtgagat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ataccaggcatcctatcactgcatcctttgaaaagcattggtggggaaggagggtgagat 344
Query: 61 cctgggggtcctgtgtgctgaaaggagaggctggataaatgacaaggactcatagtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 343 cctgggggtcctgtgtgctgaaaggagaggctggataaatgacaaggactcgtagtcact 284
Query: 121 gctgtactggtgacagatgccatggaggcaaacagacatgggggcacaaaccccacatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gctgtactggtgacagatgccatggaggcaaacagacatgggggcacaaaccccacatag 224
Query: 181 cctacactctcgtctcaacttgt 203
|||||||||||||||||||||||
Sbjct: 223 cctacactctcgtctcaacttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
