Query= MSMg01no425_p21.b1 MSMg01no425_p21.b1 CHROMAT_FILE:
MSMg01no425_p21.b1 PHD_FILE: MSMg01no425_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:21 2005
(394 letters)
>mm_chr13_22265056_22265849
Length = 794
Score = 750 bits (388), Expect = 0.0
Identities = 391/392 (99%)
Strand = Plus / Minus
Query: 1 gtgattgtgattgctaaagaaactctaatttatgctgggcatgcatgtttttacccacta 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 592 gtgattgtgattgctaaagaaactctaatttatgctaggcatgcatgtttttacccacta 533
Query: 61 gccctgtgtctctgactccagtccctgcatgaagagttctcagcaggcttgactcagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gccctgtgtctctgactccagtccctgcatgaagagttctcagcaggcttgactcagtta 473
Query: 121 ccccaatatagaaatgtacaatatgactttctatgtcttatgatatgacaaaactgctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ccccaatatagaaatgtacaatatgactttctatgtcttatgatatgacaaaactgctat 413
Query: 181 tttggcttctgtaacttgtttatgcagaggcctaaatattgttttgacttacttgaccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tttggcttctgtaacttgtttatgcagaggcctaaatattgttttgacttacttgaccca 353
Query: 241 cttacactagcagcacagaccattattgcttgcttatgtagagactgaaggtctacttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cttacactagcagcacagaccattattgcttgcttatgtagagactgaaggtctacttgt 293
Query: 301 gtcttttacatgaaaataaaaacctttcgcatacccttccctcagaacatacttgaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtcttttacatgaaaataaaaacctttcgcatacccttccctcagaacatacttgaaatt 233
Query: 361 atgctttcaggctgatatcatgttaacaagta 392
||||||||||||||||||||||||||||||||
Sbjct: 232 atgctttcaggctgatatcatgttaacaagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_p21.g1 MSMg01no425_p21.g1 CHROMAT_FILE:
MSMg01no425_p21.g1 PHD_FILE: MSMg01no425_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:22 2005
(497 letters)
>mm_chr13_22107143_22108039
Length = 897
Score = 758 bits (392), Expect = 0.0
Identities = 431/452 (95%), Gaps = 13/452 (2%)
Strand = Plus / Plus
Query: 1 caggccagactgttttgagtctttcaaatgacagcatggaggcctgagaatagaaacaaa 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 caggccagactgttttgagtctttcaaaagacagcatggaggcctgagaatagaaacaaa 260
Query: 61 cctgaaaatgactggaagaaatctggagaaagctcacttgccaccggcgctccttagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgaaaatgactggaagaaatctggagaaagctcacttgccaccggcgctccttagttt 320
Query: 121 ggaagtctctttaagccctaagtcttgaaatgtcctttcgctttccggtgtctgtttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaagtctctttaagccctaagtcttgaaatgtcctttcgctttccggtgtctgtttcag 380
Query: 181 atgagtttgtctgctcatctttgtgaatgagtcaccctctctaccaggacaaaacaccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgagtttgtctgctcatctttgtgaatgagtcaccctctctaccaggacaaaacaccta 440
Query: 241 cgctgcgtttctgctgtctttttctttggcagtctttggtttaagaataaaatttctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 cgctgcgtttctgctgtctttttctttggcagtctttggtttaagaataaagtttctg-- 498
Query: 301 taaggttttagaatttgtaaaaacatagcatgtttccgcccggtttcgaaccggagacct 360
|||||||||||| ||| | |||||||||||||||||||||||| |||||
Sbjct: 499 -----------aatttgtaaaaatataacgtgtttccgcccggtttcgaaccggggacct 547
Query: 361 ttcgcgtgttaggcgaatgtgataaccactacactacggaaacacccacgcgatgtgctt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 548 ttcgcgtgttaggcgaatgtgataaccactacactacggaaacacccacgcggtgtgctt 607
Query: 421 tgcttttctaggttgattaaaaatagagtcta 452
|||||||||||||| |||||||||||||||||
Sbjct: 608 tgcttttctaggttaattaaaaatagagtcta 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|