Query= MSMg01no426_f16.b1 MSMg01no426_f16.b1 CHROMAT_FILE:
MSMg01no426_f16.b1 PHD_FILE: MSMg01no426_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:51 2005
(487 letters)
>mm_chr13_51057138_51058024
Length = 887
Score = 870 bits (450), Expect = 0.0
Identities = 474/484 (97%), Gaps = 7/484 (1%)
Strand = Plus / Minus
Query: 5 gaattcttagacctatcccccgaagtgtgacccgaaagaggaaaggtggataagcaggag 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaattcttagacctaggccccgaagtgtgacccgaaagaggaaaggtggataagcaggag 746
Query: 65 cgcatttcatgataacacttttggtttcaaacaaacaaacaaacaaacaaacaaacaaac 124
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 745 cgcatttcatgataacac-tttggttt----caaacaaacaaacaaacaaacaaacaaac 691
Query: 125 aaaaaactgctaaaggaagaaagagaaggcacagacccgaagaccacatttatcaatccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaaaaactgctaaaggaagaaagagaaggcacagacccgaagaccacatttatcaatccc 631
Query: 185 tggttgggaaaacagtcttgtaagcctgtaagctcgaa-agaaatagctgatgggagacc 243
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 630 tggttgggaaaacagtcttgtaagcctgtaagctc-aatagaaatagctgatgggagacc 572
Query: 244 ggtgacaagcgtgagtgttcatgttcactggtggcctttgcagatggtgagtgggacaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggtgacaagcgtgagtgttcatgttcactggtggcctttgcagatggtgagtgggacaga 512
Query: 304 tgtccatccttgctcactgccaaggtacagtcatcaatgcagagagcagatctggtgtag 363
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 511 tgtccatccttgctcactgccaaggtacagtcatcaatgcagagagcagatccggtgtag 452
Query: 364 cagacttgtgactgaacactattttctacaataagcttattggggcacagccccgtggga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cagacttgtgactgaacactattttctacaataagcttattggggcacagccccgtggga 392
Query: 424 aaccacgcagtccctgtctgctttcataactgaagcccatagcatctctcgggctcacgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaccacgcagtccctgtctgctttcataactgaagcccatagcatctctcgggctcacgc 332
Query: 484 ttgt 487
||||
Sbjct: 331 ttgt 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_f16.g1 MSMg01no426_f16.g1 CHROMAT_FILE:
MSMg01no426_f16.g1 PHD_FILE: MSMg01no426_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:51 2005
(454 letters)
>mm_chr13_50926454_50927307
Length = 854
Score = 830 bits (429), Expect = 0.0
Identities = 447/453 (98%)
Strand = Plus / Plus
Query: 2 tttaggttccagattgtcaaccctgtggcttctgcctctacatctgtatttaacccctct 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 202 tttaggttccagattgtcaaccctgtggcttctgcctctacatctgcatttaacccctct 261
Query: 62 ggagctgaaccagacaacacacaatggggtagctttgaaataaaccacaagtgtctatat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 262 ggagctgaaccagacaacacacaatggggtagctttgaaataaaccacaagtgtctacat 321
Query: 122 cccccagtgcctgcactacagacttctccagctgcccagaggaggatgcaaaggaggcag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cccccagtgcctgcactacagacttctccagctgcccagaggaggatgcaaaggaggcag 381
Query: 182 ggtcatacaaattccaaagtgaataaaagggcatatagtgaaaacacaaggcagagacag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggtcatacaaattccaaagtgaataaaagggcatatagtgaaaacacaaggcagagacag 441
Query: 242 tgtgtgcttcacactattccccagactacccatgtctccggtgagaacactatgctagcc 301
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 442 tgtgcgcttcacactattccccagactacccatgtctccggtgagaacactatgttagcc 501
Query: 302 tgcccctgcaatgggggaagcttccacctctgggctgcccagttccacagcttagccaat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgcccctgcaatgggggaagcttccacctctgggctgcccagttccacagcttagccaat 561
Query: 362 gtcatttcagcatctgtttcttcagctgtaaaagtgggtcaatcagagagagcatgtacc 421
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 562 gtcatttcagcatctgttccttcagctgtaaaagtgggtcagtcagagagagcatgtacc 621
Query: 422 tacagaatattacgcacatgtattgaaacaata 454
|||||||||||||||||||||||||||||||||
Sbjct: 622 tacagaatattacgcacatgtattgaaacaata 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
