Query= MSMg01no426_h14.b1 MSMg01no426_h14.b1 CHROMAT_FILE:
MSMg01no426_h14.b1 PHD_FILE: MSMg01no426_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:01 2005
(496 letters)
>mm_chr13_49224798_49225694
Length = 897
Score = 888 bits (459), Expect = 0.0
Identities = 483/493 (97%), Gaps = 5/493 (1%)
Strand = Plus / Plus
Query: 7 gaattccattcttttc---gcactgtgtccttatcatgagtcccaccatgagctgagcct 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccattctt--catagcactgtgtccttatcatgagtcccaccatgagctgagcct 264
Query: 64 caacaccactcggccaaggctgctgtcactccagggatcagaagcacttgataccccttt 123
||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||
Sbjct: 265 caacaccactcggccaaggctgctgtcactccaggaatcagaaccactcgataccccttt 324
Query: 124 tcaccaatatgcacccatttctagtgttgcccgggtcctctggcctatctggggcccaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaccaatatgcacccatttctagtgttgcccgggtcctctggcctatctggggcccaag 384
Query: 184 acctgctctccaaaatacacccctatcaaccttggagctaggccttcacaggtgccagga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acctgctctccaaaatacacccctatcaaccttggagctaggccttcacaggtgccagga 444
Query: 244 aaggcccccaggaccaggtgtccccaaagcaaggcttctccagcactgccccagctctgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaggcccccaggaccaggtgtccccaaagcaaggcttctccagcactgccccagctctgt 504
Query: 304 ggcactaagagtaaaagtcaacaccaaagataaaataaaatccctcagcagtgccaaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggcactaagagtaaaagtcaacaccaaagataaaataaaatccctcagcagtgccaaaaa 564
Query: 364 tacctccccacgggatgagactcagcgggcgccagcttccacagcagcaactgttgctat 423
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tacctccccaagggatgagactcagcgggcgccagcttccacagcagcaactgttgctat 624
Query: 424 ggagaccaggctccagacaggccgcagggagggccagagaaacagagaggagactacaga 483
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 625 ggagaccaggctccagacaggccgcagggagggccagaggaacagagaggagactacaga 684
Query: 484 gggacggagaagg 496
|||||||||||||
Sbjct: 685 gggacggagaagg 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 897
Length adjustment: 10
Effective length of query: 486
Effective length of database: 887
Effective search space: 431082
Effective search space used: 431082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_h14.g1 MSMg01no426_h14.g1 CHROMAT_FILE:
MSMg01no426_h14.g1 PHD_FILE: MSMg01no426_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:01 2005
(500 letters)
>mm_chr13_49289461_49290360
Length = 900
Score = 634 bits (328), Expect = 0.0
Identities = 337/340 (99%)
Strand = Plus / Minus
Query: 1 cttctgaggcctagttcacagactctccagtctaccttaggctctgctactacaaccatt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 540 cttctgaggcctagttcacagaccctccagtctaccttaggctctgctactacaaccatt 481
Query: 61 gcgcaggtacagaccgtgagatcccagaacacccctcattaatctgaggtcagaaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gcgcaggtacagaccgtgagatcccagaacacccctcattaatctgaggtcagaaagtca 421
Query: 121 atgtggggcccttgccattcctgatgacatcttctgctctggacaggcaccaaagttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atgtggggcccttgccattcctgatgacatcttctgctctggacaggcaccaaagttgcc 361
Query: 181 ctggcaacccagcccactttcctatcagctatccattcatgcctacggtcacctgtgggt 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 360 ctggcaacccagcccactttcctatcagctatccatccatgcctacggtcacctgtgggt 301
Query: 241 catctgcaaggggacggacgaccagtgattaagtttgggatttagaggttatactctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 catctgcaaggggacggacgaccagtgattaagtttgggatttagaggttatactctgca 241
Query: 301 ttttggattttcactcagaaccagaaagaagagttggttc 340
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 240 ttttggattttcactcagaaccagaaagaagagttagttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
