Query= MSMg01no426_o14.b1 MSMg01no426_o14.b1 CHROMAT_FILE:
MSMg01no426_o14.b1 PHD_FILE: MSMg01no426_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:37 2005
(415 letters)
>mm_chr13_43022976_43023790
Length = 815
Score = 741 bits (383), Expect = 0.0
Identities = 404/411 (98%)
Strand = Plus / Minus
Query: 5 tcaaaacgattcactgtgtgcttatctggaaaacaggcactcttgcctcgtggtgggttt 64
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 615 tcaaaacgattcactgtgtgcttatctggaaaacaggcactcttgccttgtggtgggttt 556
Query: 65 cgtttacagtggctggccatgagactcctctgtcactgagtgccgaaattggcagagctt 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cgtttacagtggctggcgatgagactcctctgtcactgagtgccgaaattggcagagctt 496
Query: 125 gcctcttaaatgcgtggcagatcctcggtgcctcctcttgccagcacatgctttctcgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 495 gcctcttaaatgcgtggcagatcctcggtgcctcctcttgccagcacatgctttctcatc 436
Query: 185 catccttttaccatgctgaggagctccactgccagatgatgatgaggctcccaatgtgag 244
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 435 catccttttgccatgctgaggagctccactgccaggtgatgatgaggctcccaatgtgag 376
Query: 245 ttaagtactatttacagactctggcatccatcagaccagcacttcccgttggcacgttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttaagtactatttacagactctggcatccatcagaccagcacttcccgttggcacgttta 316
Query: 305 agtccctcaaaccgagcctagctctccctagcccagaaggctggctgctaactatgcagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agtccctcaaaccgagcctagctctccctagcccagaaggctggctgctaactatgcagc 256
Query: 365 agactctatgagtaccgagctcacccgtcagatccagaggtgtcgctactg 415
|||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 255 agactctatgagtacctagctcacccgtcagatccagaggtgttgctactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_o14.g1 MSMg01no426_o14.g1 CHROMAT_FILE:
MSMg01no426_o14.g1 PHD_FILE: MSMg01no426_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:37 2005
(231 letters)
>mm_chr13_42847470_42848101
Length = 632
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 1 caatatgtgcatctacgctcttttagaatccaagaatttaaactctgtcattacttagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatatgtgcatctacgctcttttagaatccaagaatttaaactctgtcattacttagac 260
Query: 61 tttgccaaggccaacaagctgcctaatttctcttgattggaaagat-tttttttaaagga 119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tttgccaaggccaacaagctgcctaatttctcttgattggaaagatatttttttaaagga 320
Query: 120 gaaaagatatctgtagacatatggcagagaaataacagctgccatttctagacatgcgtt 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaggatatttgtagacatatggcagagaaataacagctgccatttctagacatgcgtt 380
Query: 180 ttcttttctcaccctgggtaccctctgatttaagtgagggtgtgttgttgtt 231
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttttctcaccctgggtaccctctgatttaagtgagggtgtgttgttgtt 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 632
Length adjustment: 9
Effective length of query: 222
Effective length of database: 623
Effective search space: 138306
Effective search space used: 138306
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
