Query= MSMg01no427_b08.b1 MSMg01no427_b08.b1 CHROMAT_FILE:
MSMg01no427_b08.b1 PHD_FILE: MSMg01no427_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:51 2005
(581 letters)
>mm_chr13_22983749_22984729
Length = 981
Score = 1093 bits (565), Expect = 0.0
Identities = 571/573 (99%)
Strand = Plus / Plus
Query: 9 gaattccatcctctgtactcatttcaaatccaatcagaaagcatctggttgcttccatat 68
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattccatcctctgtattcatttcaaatccaatcagaaagcatctggttgcttccatat 268
Query: 69 cagtcacacatttagtgcaacagtgaccatattgtatgtgtcaggttgcttatgtagcat 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cagtcacacatttagtgcaacagtgaccatattgtatgtgtcaggttgcttatgtagcat 328
Query: 129 gcttgatctgcagatgaggaaaactagtgctgcagaaactgaatatccacatggagtgta 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcttgatctgcagatgaggaaaactagtgctgcagaaactgaatatccacatggagtgta 388
Query: 189 atcaatctaggtctgtatgtctagctcttcataaaaattgaatctcagtggaccaaagac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atcaatctaggtctgtatgtctagctcttcataaaaattgaatctcagtggaccaaagac 448
Query: 249 attaatgtaagacaagggactacaaactgttggaggaaatggaggggaaagaccttcaag 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attaatgtaagacaagggactacaaactgttggaggaaatggaggggaaagaccttcaag 508
Query: 309 atataaacatgatcaaacctgttctcaataggacttcttagttgctcaggaaacaaaaca 368
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atataaacatgagcaaacctgttctcaataggacttcttagttgctcaggaaacaaaaca 568
Query: 369 attgataaatgggacttcagaaagttaaaaaccttcagtcccccaacaccaaaagtgaat 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 attgataaatgggacttcagaaagttaaaaaccttcagtcccccaacaccaaaagtgaat 628
Query: 429 tgaaaagtagactatagaatggagaaaatcttgtcaggctatgtatctgactgcttcata 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgaaaagtagactatagaatggagaaaatcttgtcaggctatgtatctgactgcttcata 688
Query: 489 gagggtgttctctttagagagttccaatgtctctattgcagctttgcagacactgcaggt 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gagggtgttctctttagagagttccaatgtctctattgcagctttgcagacactgcaggt 748
Query: 549 ctgcttttttggggatgttcctcagtttttcca 581
|||||||||||||||||||||||||||||||||
Sbjct: 749 ctgcttttttggggatgttcctcagtttttcca 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_b08.g1 MSMg01no427_b08.g1 CHROMAT_FILE:
MSMg01no427_b08.g1 PHD_FILE: MSMg01no427_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:51 2005
(511 letters)
>mm_chr13_23190441_23191351
Length = 911
Score = 845 bits (437), Expect = 0.0
Identities = 450/459 (98%), Gaps = 8/459 (1%)
Strand = Plus / Minus
Query: 1 tttgctacagatgcctaattttgctcttggaccttctgttcttggttctactcacatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tttgctacagatgcctaattttgctcttggaccttctgttcttggttctactcacatgga 400
Query: 61 gatgatgatgatgacgacgacgacaattggacacgagcaccatgctgatgcctctcagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gatgatgatgatgacgacgacgacaattggacacgagcaccatgctgatgcctctcagcc 340
Query: 121 ttcacagaacacagttctttatgtccttcatctctaaattttttctatgggaaattcgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttcacagaacacagttctttatgtccttcatctctaaattttttctatgggaaattcgaa 280
Query: 181 caatggactccatcattcagtttccaagccatgatacttatgcatcgccttagattcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 caatggactccatcattcagtttccaagccatgatacttatgcatcgccttagattcctc 220
Query: 241 ccttcctagatcctctttg--------tagagacttgtcccttaagtagcacattgcact 292
|||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 219 ccttcccagatcctctttgcagacctgtagagacttgtcccttaagtagcacattgcact 160
Query: 293 aataaaaaaatgaaggtaatccaaagaatggcaatacttgcccaattagggttgctttcc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aataaaaaaatgaaggtaatccaaagaatggcaatacttgcccaattagggttgctttcc 100
Query: 353 agggaaagtcatgtgaattttctttgtctccaactccaaattgaccttggcaataagcaa 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 agggaaagtcatgtgaattttctttgtctccaactccaaattgaccttggcaataagcaa 40
Query: 413 cacatagattaattaaatggtgtttaccaaatttatctc 451
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 cacatagattaattaaatggtgtttaccaaatttatctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
