Query= MSMg01no429_f20.b1 MSMg01no429_f20.b1 CHROMAT_FILE:
MSMg01no429_f20.b1 PHD_FILE: MSMg01no429_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:49 2005
(519 letters)
>mm_chr13_114687102_114688020
Length = 919
Score = 938 bits (485), Expect = 0.0
Identities = 512/531 (96%), Gaps = 16/531 (3%)
Strand = Plus / Plus
Query: 5 gaattcctggctagcgtttcctctcctttcccttttgtctcatgcttgcaattcccgaag 64
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattcctggctagtgtttcctctcctttcccttttgtcttatgcttgcaattcccgaag 264
Query: 65 ctccgtcagcacattttcacgccgggtcttttaaaacgagccaaaggtgggatggtatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctccgtcagcacattttcacgccgggtcttttaaaacgagccaaaggtgggatggtatga 324
Query: 125 accgcctggagcacgccaacgcgcggagagggccaggaaggcgggaaggcaggtgccagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accgcctggagcacgccaacgcgcggagagggccaggaaggcgggaaggcaggtgccagc 384
Query: 185 acagggcctcttccaatgacctgcccttaggtttttctcttcttctggtctctctttaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagggcctcttccaatgacctgcccttaggtttttctcttcttctggtctctctttaag 444
Query: 245 gtacacattaagatccctggttggagagtagggtggaaggagacccaaactcggtctttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtacacattaagatccctggttggagagtagggtggaaggagacccaaactcggtctttt 504
Query: 305 tgtattttgttggaatttgaaaagaaatttcaaatattaaaatatttgaatattaatttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtattttgttggaatttgaaaagaaatttcaaatattaaaatatttgaatattaatttc 564
Query: 365 agtattaaaattggtattgaaataaagattgaagctcttttatagataccatttattgta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtattaaaattggtattgaaataaagattgaagctcttttatagataccatttattgta 624
Query: 425 acaaacaaacaaacaa----------------ccaggccagcactatgctcttcatctcc 468
|||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 625 acaaacaaacaaacaaacaaacaaacaaacaaccaggccagcaccatgctcttcatctcc 684
Query: 469 tttctaagttcatctggttgacctccatgcagagtggaacttggtcgccag 519
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttctaagttcatctggttgacctccatgcagagtggaacttggtcgccag 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_f20.g1 MSMg01no429_f20.g1 CHROMAT_FILE:
MSMg01no429_f20.g1 PHD_FILE: MSMg01no429_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:50 2005
(460 letters)
>mm_chr13_114851609_114852468
Length = 860
Score = 874 bits (452), Expect = 0.0
Identities = 458/460 (99%)
Strand = Plus / Minus
Query: 1 acctgcgatgcttgtatgccttaagactatctagggaggcagggggatgtcagtcaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 acctgcgatgcttgtatgccttaagactatctagggaggcagggggatgtcagtcaagac 601
Query: 61 acagatactgtctcacacttggaactaaagtttagaaatttggtaacatctttatcatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acagatactgtctcacacttggaactaaagtttagaaatttggtaacatctttatcatgc 541
Query: 121 ccccttgctctgagagcgacaaagaaccaggcctgagtacatacagcttgaacttcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ccccttgctctgagagcgacaaagaaccaggcctgagtacatacagcttgaacttcattc 481
Query: 181 aaaccaaggacccaaaacaagctgagacagcaaaccctagacaataagaaatacagaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aaaccaaggacccaaaacaagctgagacagcaaaccctagacaataagaaatacagaggc 421
Query: 241 ttcttgacctaagtatgacaacagagtgagcctacaaagaacataacacagacgtgaata 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 420 ttcttgacctaagtatgacaacagagtgagcctacaaagaacataatacagacgtgaata 361
Query: 301 agatttctcactcatcctttctgccagtactttcctgaggtctccctagaccttcatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agatttctcactcatcctttctgccagtactttcctgaggtctccctagaccttcatgtg 301
Query: 361 tgcacttttacataaaactgtaaaacctgacttccttgtgggtctctggcattgaggtgg 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgcacttttatataaaactgtaaaacctgacttccttgtgggtctctggcattgaggtgg 241
Query: 421 tcccaagaacgaacctaggtaccggtcagcatcctctaag 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tcccaagaacgaacctaggtaccggtcagcatcctctaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
