Query= MSMg01no432_g09.b1 MSMg01no432_g09.b1 CHROMAT_FILE:
MSMg01no432_g09.b1 PHD_FILE: MSMg01no432_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:06 2005
(251 letters)
>mm_chr13_24943679_24944330
Length = 652
Score = 478 bits (247), Expect = e-139
Identities = 250/251 (99%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 1 ccctctgcttcc-aaatgctgcctaatctgacacagaactgaatttctctgtcctttggc 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctctgcttcccaaatgctgcctaatctgacacagaactgaatttctctgtcctttggc 260
Query: 60 ccaggcctcagaggaagtcttgggttgatgtggctgcccacagtgtcctgcatagccact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggcctcagaggaagtcttgggttgatgtggctgcccacagtgtcctgcatagccact 320
Query: 120 ctaccacatttctcctgaactgtctcccactctgagtaatacaactgttcttgtgtttgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaccacatttctcctgaactgtctcccactctgagtaatacaactgttcttgtgtttgc 380
Query: 180 tgactcccctggagtttgcccttagccctcaccttccgtcttcccatcagcaggtcctgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactcccctggagtttgcccttagccctcaccttccgtcttcccatcagcaggtcctgc 440
Query: 240 tgatcgcctga 250
|||||||||||
Sbjct: 441 tgatcgcctga 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 652
Length adjustment: 9
Effective length of query: 242
Effective length of database: 643
Effective search space: 155606
Effective search space used: 155606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no432_g09.g1 MSMg01no432_g09.g1 CHROMAT_FILE:
MSMg01no432_g09.g1 PHD_FILE: MSMg01no432_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:06 2005
(494 letters)
>mm_chr13_25077380_25078273
Length = 894
Score = 723 bits (374), Expect = 0.0
Identities = 389/394 (98%)
Strand = Plus / Minus
Query: 101 ctctaggctgctgtcatttgtgctttcctctttacatcatctacttattttacttgggtt 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ctctaggctgctgtcatttgtgctttcctctttacatcatctacttattttacttgggtt 835
Query: 161 gtgtgtgcatgcatgtgtgccaaagcatgcacgtggaggtcagagggcaacttgagagta 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gtgtgtgcatgcatgtgtgccaaagcatgcacgtggaggtcagagggcaacttgagagta 775
Query: 221 ggttctctcctaccacgtgggtcctaggccctccagcttggcagcaagctcctttagaca 280
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ggttttctcctaccacgtgggtcctaggccctccagcttggcagcaagctcctttagaca 715
Query: 281 ctgagccacctcactggcccaacaatgttttcaatatgaggtgaatactcttcatccaga 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ctgagccacctcactggcccaacaatgttttcaatatgaggtgaatactcttcatccaga 655
Query: 341 atgcctgggtccagagtttagatttgggatttttctggatgtgaagtatctacagataca 400
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 654 atgcctgggtccagagtttagatttgggatttttctggatgtgaagtatctacagatata 595
Query: 401 tactgggatgcccagaggatgggtctcagactaaacaggagatatatctgacaggcccac 460
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 594 tactgggatgtccagaggatgtgtctcagactaaacaggagatatatctgacaggtccac 535
Query: 461 agcctgacagttctatacagtatgctaatgactg 494
||||||||||||||||||||||||||||||||||
Sbjct: 534 agcctgacagttctatacagtatgctaatgactg 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
