Query= MSMg01no432_i19.b1 MSMg01no432_i19.b1 CHROMAT_FILE:
MSMg01no432_i19.b1 PHD_FILE: MSMg01no432_i19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:18 2005
(396 letters)
>mm_chr13_48945726_48946521
Length = 796
Score = 603 bits (312), Expect = e-177
Identities = 368/416 (88%), Gaps = 46/416 (11%)
Strand = Plus / Plus
Query: 5 gaattcagagtgagactacctataaatctaaactctcatagcatctcctgcactgtggac 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagtgagactagctataaatctaaactctcatagcatctcctgcactgtggac 264
Query: 65 agacgcaagccaacactggcacaaacctataactgagcctgccctggtaaagtgcagaga 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 agacgcaagccaacactggcacaaccctataactgagcctgccctggtaaagtgcagaga 324
Query: 125 ctggattaacactcagatggtggctttttgtttcatgagctttacctcaaaagactcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctggattaacactcagatggtggctttttgtttcatgagctttacctcaaaagactcaaa 384
Query: 185 tccagtgttctcaagagcactgtctaagcagtaagcctctgtgtctgcatgagcctgcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccagtgttctcaagagcactgtctaagcagtaagcctctgtgtctgcatgagcctgcag 444
Query: 245 ccgaaggccaggaac------------------------acacacacacacacacacctg 280
||||||||||||||| |||||||||||||||||||||
Sbjct: 445 ccgaaggccaggaacgaacacacacacacacacacacacacacacacacacacacacctg 504
Query: 281 taaagcctctgtgtctgcatgagcctgcagccgaaggccaggcgcgcgcgcgcgcgcaca 340
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaagcctctgtgtctgcatgagcctgcagccgaaggccaggcgc--------------- 549
Query: 341 cacacacacacacacacacacacacacacacacacacctgtaaagaacacacgcag 396
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 -------acacacacacacacacacacacacacacacctgtaaagaacacacgcag 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 91
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_i19.g1 MSMg01no432_i19.g1 CHROMAT_FILE:
MSMg01no432_i19.g1 PHD_FILE: MSMg01no432_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:19 2005
(374 letters)
>mm_chr13_49076719_49077492
Length = 774
Score = 685 bits (354), Expect = 0.0
Identities = 369/374 (98%)
Strand = Plus / Minus
Query: 1 agtatatagattaggctggccttgaactcacgattctcttgcctctgcttcctgaatgct 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 517 agtatatagattaggctggccttgaactcatgattctcttgcctctgcttcctgaatgct 458
Query: 61 gcccttaaaggcaagccccaccctgcccagctcacacatgctctctgaacacaggcctct 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 457 gcccttaaaggcaagccccaccctgcccagctcacacatgctctccgaacacaggcctct 398
Query: 121 ctccatgatccatctctctggtttctagccattctgctcagcccccaacccaagtgttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 397 ctccatgatccatctctctggtttctagccattctgctcagcccccaactcaagtgttgg 338
Query: 181 agccatctctaggccagtgggttttggcagtactgtcaataggtctgtactagatagttt 240
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 337 agccatctctaggccagcgggttttggcagtactgtcaataggtctgtactaaatagttt 278
Query: 241 tatgtcaacttgacaaaaggtgtcatctgagaggagttaacctcatcacacttcatgact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatgtcaacttgacaaaaggtgtcatctgagaggagttaacctcatcacacttcatgact 218
Query: 301 gatggtggagggctcagttcattgtgagtggggtgatccacgcccaggtggtcttgggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gatggtggagggctcagttcattgtgagtggggtgatccacgcccaggtggtcttgggtt 158
Query: 361 ttataaggaagcag 374
||||||||||||||
Sbjct: 157 ttataaggaagcag 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
