Query= MSMg01no432_j22.b1 MSMg01no432_j22.b1 CHROMAT_FILE:
MSMg01no432_j22.b1 PHD_FILE: MSMg01no432_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:24 2005
(468 letters)
>mm_chr13_105164706_105165572
Length = 867
Score = 868 bits (449), Expect = 0.0
Identities = 461/465 (99%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 4 aattctttaaaaattctcactcacatgggaaataaaagtgaaaaagcatctgccctgttt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aattctttaaaaattctaactcacatgggaaataaaagtgaaaaagcatctgccctgttt 263
Query: 64 tacacacactgaataaatgaaaacgaacattacagttagcaaagctctttaaactgaggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacacacactgaataaatgaaaacgaacattacagttagcaaagctctttaaactgaggt 323
Query: 124 tctctgtctggctttgggcaatctttatgttatttgttccactgaattaaaatactatgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctctgtctggctttgggcaatctttatgttatttgttccactgaattaaaatactatgt 383
Query: 184 tttagtgaggacaaactgtgtaaagtagaaattatgtagaaagaacattcccttattcta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttagtgaggacaaactgtgtaaagtagaaattatgtagaaagaacattcccttattcta 443
Query: 244 gttcttatgacccgaaatgaaatatgaattcgctgatattactaaacatttctagtgttt 303
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 444 gttcttatgacccgaaatgaaatatgaattcgctgaaag-actaaacatttctagtgttt 502
Query: 304 gtgagcaagcactttggaccttaactgtccttcagcccatcaactagcgacatgtcttac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtgagcaagcactttggaccttaactgtccttcagcccatcaactagcgacatgtcttac 562
Query: 364 cgcagcacctgtgttctatgtaagggggaagtatagaaattaagtcgttatgattacaac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cgcagcacctgtgttctatgtaagggggaagtatagaaattaagtcgttatgattacaac 622
Query: 424 tataagtatttttgtttaattttccacaattcatgtttttaattg 468
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tataagtatttttgtttaattttccacaattcatgtttttaattg 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_j22.g1 MSMg01no432_j22.g1 CHROMAT_FILE:
MSMg01no432_j22.g1 PHD_FILE: MSMg01no432_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:24 2005
(455 letters)
>mm_chr13_105332354_105333208
Length = 855
Score = 828 bits (428), Expect = 0.0
Identities = 451/464 (97%), Gaps = 9/464 (1%)
Strand = Plus / Minus
Query: 1 tagtggctgccttaggtgatctggactcactgcatcttccatttctactccatcagactt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 590 tagtggctgccttaggtgatctgaactcactgcatcttccatttctactccatcagactt 531
Query: 61 ccctcgactcatatgaggatttctcctgtagctgaacacgtgccaagtctagaggggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ccctcgactcatatgaggatttctcctgtagctgaacacgtgccaagtctagaggggcaa 471
Query: 121 agcaagagaccggaaatggtagccgttcttcctgacgtgggaacttttccctttcctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agcaagagaccggaaatggtagccgttcttcctgacgtgggaacttttccctttcctgct 411
Query: 181 ctcaagagttcctttccagagaacccaagggactggaaaggctgcaacagtaggctcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctcaagagttcctttccagagaacccaagggactggaaaggctgcaacagtaggctcact 351
Query: 241 agtcttccgagcaaggaagcactctggcctactgcagggcagacccatgctggaggggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agtcttccgagcaaggaagcactctggcctactgcagggcagacccatgctggaggggca 291
Query: 301 ggaaggaggaaggaagcagagcttaggtccttcctcctcttgccacagattctctaggca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 290 ggaaggaggaaggaagcagagcttaggtccttcctcctcttgccacagattctctaggta 231
Query: 361 gttcctttttcctctctcccttctccaagtctcctccccttcct---------cctcctc 411
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 230 gttcctttttcctctctcccttctccaagtctcctccccttccttctcctcctcctcctc 171
Query: 412 ctcctccttctcatcttcttcctctccctcctcccctcccctct 455
|||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 170 ctcctccttctcatctccttcctctctctcctcccctcccctct 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
