Query= MSMg01no433_l20.b1 MSMg01no433_l20.b1 CHROMAT_FILE:
MSMg01no433_l20.b1 PHD_FILE: MSMg01no433_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:55 2005
(202 letters)
>mm_chr13_45675062_45675662
Length = 601
Score = 362 bits (187), Expect = e-104
Identities = 196/199 (98%), Gaps = 1/199 (0%)
Strand = Plus / Minus
Query: 4 ggaattctccccgttctctaccagcagttgttatttttcccatttctgtttatgttttgt 63
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggaattctccccattct-taccagcagttgttatttttcccatttctgtttatgttttgt 343
Query: 64 ttgttaatgtgattgtttaatacaatcttaatgggtcttactggcctctcacttatggac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttgttaatgtgattgtttaatacaatcttaatgggtcttactggcctctcacttatggac 283
Query: 124 acgtcaggtcgcctttaaagttcaggcagagagatgtggacactatgtttatgttggcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 acgtcaggtcgcctttaaagttcaggcagagagatgtggacactatgtttatgttggcag 223
Query: 184 gggtgatggagatgtttta 202
|||||||||||||| ||||
Sbjct: 222 gggtgatggagatggttta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 601
Length adjustment: 8
Effective length of query: 194
Effective length of database: 593
Effective search space: 115042
Effective search space used: 115042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_l20.g1 MSMg01no433_l20.g1 CHROMAT_FILE:
MSMg01no433_l20.g1 PHD_FILE: MSMg01no433_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:55 2005
(311 letters)
>mm_chr13_45457524_45458234
Length = 711
Score = 578 bits (299), Expect = e-169
Identities = 308/311 (99%)
Strand = Plus / Plus
Query: 1 attaaaaaatgtatctttgacacaaccctatatgtagctatagacagatggatcagtact 60
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 attaaaaaatgtatctctgacacaaccctatatgtagctagagacagatggatcagtact 260
Query: 61 atctaatgaagtaaacattcctgcctgagtattagatatctttaatttgtcactgacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctaatgaagtaaacattcctgcctgagtattagatatctttaatttgtcactgacttg 320
Query: 121 gttaacaaatggtatataagtatcttaatatttcctgatgctataatagaacgcacgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaacaaatggtatataagtatcttaatatttcctgatgctataatagaacgcacgaga 380
Query: 181 ctggataatttacaaagagaagaggctcattttgacttatagttctgcaggttgggctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggataatttacaaagagaagaggctcattttgacttatagttctgcaggttgggctgt 440
Query: 241 tcaagctgtacctggcaagccacctaggttgtgttatcccatgaagggtatatggatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tcaagctgtacctggcaagccacctaggttgtgttatcccatgaagggtgtatggatgga 500
Query: 301 tgaatcatctg 311
|||||||||||
Sbjct: 501 tgaatcatctg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
