NCCCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGATCTACTCAGACTTGAGCTTTGTACAAGGAGATAAG
AATGGATCAATTCGCATTCTTCTACATGATAACTGCCAGTTGTGTCAGCA
CCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCT
TGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCA
ATTCTATTCCATTGATCTACCTATCTGTTGCTGTACCAGTACCATGCAGT
TCTTATCACAATTGCTCTGTAGTACATCTTAATGTCAGGCATGGTGATTC
CACCAGAGGTTCTTTTATTGTTGAGGATAGTTTTTGCTATCCTAGGTTTT
TTATTTTTCCAGATGAATTTGCAGATTACCCTTTCTAACTCAGTGAAGAA
TTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTGTAGATTGCTTTCA
GCAGGATAGCCATTTTTACTATATTAATCCTGCCAACCCATGAGCATGGG
AGATCTTTCCATCTTCTGATATCTTCTTCATTTTCTTTCTTCAGAGACTT
GAAGTTCTTATCAAACAAATCTTTCACTTCCTTATTTAGAGTCACACCAA
GGTATTTTATATTATTTGTGACCATTGCGAACGTTGTTTTTTCCCTAATT
TCTTTCTCACCCCGCTTATTCTTCGTACAGATAAA

TGGGACGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCTTCCACAGTGTGAGT
TGTTTCACTGTGCCCTTCCCAGTAGATTGCTAGAAGCCTCTGAAGTTATA
AGCTGAAACAAATCATTTCTCCCTCAGGTTGTGGCTGTCACGTATCTATA
ACAGCAATGAGAAAAGCATATATCTTGAATTCAGCTCACTCCACTCCACT
CAACAGATGTATGTTGAAAACCCAAGGTGAGTTTTGTCTTTTCCTAGTTT
CTGGGGATTTGTAGAGCTGGTCAGGCAATGATCACAGAGAGTAGTCACAA
TAGTGTATGTGAGAATGACACAAGAGATTCAGTCATATGACAACAAAGTT
GGCAGAAAGTGAGGGCCATAGATGAAATAAATGGAAAGAATAGGATGTCA
CATGTCCATCAGGAAGAGGTTTATGGGCAAATGACAGGGACTAATGGCAG
AAAACATGGAGCAGTGGAGCATCTCATTGTCCTCAGTTAGAGATGGTGCA
GATGGGACCAAATGAAAGGGCTAATGTCCCCGTTGTCTGGCAACTCGAGG
ATTCCGCAGAAACCAGAGGCACACTCAGACCATGCCCAAAGAAATAGAGA
GTCTAGAGCACACTGTCTTATTCTGCCTGTGATCCCCTTAACTGAATTCT
TTTATCTTGGGGGGCCAAAGGGACCAAGAATAGGGGTAAGGCATCCT

Query= MSMg01no436_g04.g1 MSMg01no436_g04.g1 CHROMAT_FILE:
MSMg01no436_g04.g1 PHD_FILE: MSMg01no436_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:26 2005
         (522 letters)



>mm_chr13_42114447_42115370
          Length = 924

 Score =  909 bits (470), Expect = 0.0
 Identities = 507/524 (96%), Gaps = 10/524 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtcttccacagtgtgagttgtttcactgtgcccttcccagtagattgctagaagcctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tgtcttccacagtgtgagttgtttcactgtgcccttcccagtagattgctagaagcctct 794

                                                                       
Query: 61  gaagttataagctgaaacaaatcatttctccctcaggttgtggctgtcacgtatctataa 120
           |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 793 gaagttatgagctgaaacaaatcatttctccctcaggttgtggctgtcacatatctataa 734

                                                                       
Query: 121 cagcaatgagaaaagcatatatcttgaattcagctcactccactccactcaacagatgta 180
           |||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||
Sbjct: 733 cagcaatgagaaaagcatatatcttgaattcagctcactccact-ca---aacagatgta 678

                                                                       
Query: 181 tgttgaaaacccaaggtgagttttgtcttttcctagtttctggggatttgtagagctggt 240
           ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 677 tgttgaaaacctaaggtgagttttgtcttttgctagtttctggggatttgtagagctggt 618

                                                                       
Query: 241 caggcaatgatcacagagagtagtcacaatagtgtatgtgagaatgacacaagag----- 295
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
Sbjct: 617 caggcaatgatcacagagagtagtcacaatagtgtatgtgagaacgacacaagagatggc 558

                                                                       
Query: 296 -attcagtcatatgacaacaaagttggcagaaagtgagggccatagatgaaataaatgga 354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 557 tattcagtcatatgacaacaaagttggcagaaagtgagggccatagatgaaataaatgaa 498

                                                                       
Query: 355 aagaataggatgtcacatgtccatcaggaagaggtttatgggcaaatgacagggactaat 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagaataggatgtcacatgtccatcaggaagaggtttatgggcaaatgacagggactaat 438

                                                                       
Query: 415 ggcagaaaacatggagcagtggagcatctcattgtcctcagttagagatggtgcagatgg 474
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggcagaaaacatggagcagtggcgcatctcattgtcctcagttagagatggtgcagatgg 378

                                                       
Query: 475 gaccaaatgaaagggctaatgtccccgttgtctggcaactcgag 518
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaccaaatgaaagggctaatgtccccgttgtctggcaactcgag 334


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 924
Length adjustment: 10
Effective length of query: 512
Effective length of database: 914
Effective search space:   467968
Effective search space used:   467968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)