ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGGAT
TCAAGGCCCATATCTAATCATAACAAAAGCAATCTATAGCAAACCAGTAG
CCAACATTAAACTAAATGGAGAGAAACTCGAAGCAATCCCATTAAGATCA
GGGACTAGACAAGGCTGCCTACTTTCTCCCTACCTATTCAATATAGCACT
TGAAGTCCTAGCCAGAGCAATTCGACAACAAAAGAAGATCAAGGGGATAC
AAATTGGATAGGAAGAAGTCAAAATATCACTATTTGCAGAAGATATGATA
GGACCCTAAAACTTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCA
ATGCAGTAGCTGGATATAAAATTAACTCAAACAAATAAGTGGCCTTCCTC
TACACAAAGGATAAACAGGCTGAGAAAGAAATTATGGAAACAACACCCTT
CACAATAGTCACAAATAATATAAAATACCTTTGTGTGACTCTAAGGAAGG
GGAAAATTTGTATGACAAGAACTTCAAGTCTCCAAAGAAAGAAATTGAAG
AAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCATGATT
AATATAGCAAAACTGGCTATCCTGCTGAAAGCAATCTGTAGATTCATAGC
AATCCCCATCAAAATTCTAACTCAAGTCTTCACTGAGTTAGAAAGGGCAT
TTGTCAATTCCTCTTGAATAACCCAAAACCTGGGATAGCTAAACTATTCC
TCAACAATAAAGAACCT

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCATGATGTCAGGATGTCCTCGAGACATAG
TCTTGAATGGCACATGGTTATAAGAGGCTGTAACATTTACCCTGGAAAAA
AACATGTTTGCTTCAAGCAACAATTGACATTTCTGGCTTCTTGCCTGAAT
GTCAAGCTCTGTTTCAAATCACTTTCACTCATCATTTTGTGCCTTGACCT
TGCACCTCAAGCTAATATCAAATCACTGGGACTACTGGTGACTTGCCTTT
ACTTCTAAAAATACATATCCCTGCCAATAACATAAGGATCAAGTTCCTAA
GAAGCCATAGTTAACATATGAAATAAAAAAACAGAACCTATAAAAGTAAC
AAAAGAACTGTAGATTTGGAAAATGTTCAAAATATTAGTCCATTCTTAAG
ATCACATGAACCTCTGAACCTCCAATGTCCTCTGTGACAGCTATGAACTG
CAGTTGCTAGGGATGATTGAGGTTTGCATCTGAAATATTTCCCATAGGCT
CATATGTTTGAATATCTGGCTCATAGATGGTAGGGCTGTTTGAGAATTTG
TGAAACTTGTACCACTCCCAGATTGTGAGAGTGTGTCCCTGCACATAAAA
CTTTTGACAATTATATCCTGACCGCTGGGCAAACCCCCCCGTTTTAAATA
ATATTGACGGTAACTCCTTCCTCCTGGTAACCATCTCCACCATCTTTTGA
TTTTATCCATCTATCCCTTTCN

Query= MSMg01no437_i18.g1 MSMg01no437_i18.g1 CHROMAT_FILE:
MSMg01no437_i18.g1 PHD_FILE: MSMg01no437_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:58 2005
         (500 letters)



>mm_chr13_4648300_4649200
          Length = 901

 Score =  961 bits (497), Expect = 0.0
 Identities = 500/501 (99%), Gaps = 1/501 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgatgtcaggatgtcctcgagacatagtcttgaatggcacatggttataagaggctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 catgatgtcaggatgtcctcgagacatagtcttgaatggcacatggttataagaggctgt 587

                                                                       
Query: 61  aacatttaccctggaaaaaaacatgtttgcttcaagcaacaattgacatttctggcttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aacatttaccctggaaaaaaacatgtttgcttcaagcaacaattgacatttctggcttct 527

                                                                       
Query: 121 tgcctgaatgtcaagctctgtttcaaatcactttcactcatcattttgtgccttgacctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgcctgaatgtcaagctctgtttcaaatcactttcactcatcattttgtgccttgacctt 467

                                                                       
Query: 181 gcacctcaagctaatatcaaatcactgggactactggtgacttgcctttacttctaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gcacctcaagctaatatcaaatcactgggactactggtgacttgcctttacttctaaaaa 407

                                                                       
Query: 241 tacatatccctgccaataacataaggatcaagttcctaagaagccatagttaacatatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tacatatccctgccaataacataaggatcaagttcctaagaagccatagttaacatatga 347

                                                                       
Query: 301 aat-aaaaaaacagaacctataaaagtaacaaaagaactgtagatttggaaaatgttcaa 359
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aataaaaaaaacagaacctataaaagtaacaaaagaactgtagatttggaaaatgttcaa 287

                                                                       
Query: 360 aatattagtccattcttaagatcacatgaacctctgaacctccaatgtcctctgtgacag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aatattagtccattcttaagatcacatgaacctctgaacctccaatgtcctctgtgacag 227

                                                                       
Query: 420 ctatgaactgcagttgctagggatgattgaggtttgcatctgaaatatttcccataggct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctatgaactgcagttgctagggatgattgaggtttgcatctgaaatatttcccataggct 167

                                
Query: 480 catatgtttgaatatctggct 500
           |||||||||||||||||||||
Sbjct: 166 catatgtttgaatatctggct 146


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 901
Length adjustment: 10
Effective length of query: 490
Effective length of database: 891
Effective search space:   436590
Effective search space used:   436590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)