MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-439I05
Chromosome	13 (Build37)
Map Location	101,987,245 - 101,987,493
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Naip5, Birc1c-ps1, Birc1f, EG667838, Naip1, Gtf2h2, Ocln, LOC667861, Marveld2, Rad17, Taf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5, LOC619865, LOC619917, EG619937
Downstream gene	4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Naip5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17951 MGI:1298220
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc1c-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53898 MGI:1858253
definition	gene_synonym : delta Naip; Naip3-ps1 note : baculoviral IAP repeat-containing 1c, pseudogene 1 pseudo : _no_value

name	Birc1f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17952 MGI:1298222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667838 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667838 MGI:3643711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins pseudo : _no_value

name	Naip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17940 MGI:1298223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2h2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23894 MGI:1345669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ocln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18260 MGI:106183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667861 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667861
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Marveld2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218518 MGI:2446166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Rad17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19356 MGI:1333807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Taf9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108143 MGI:1888697
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Ccdc125 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76041 MGI:1923291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdk7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12572 MGI:102956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrps36 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66128 MGI:1913378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cenph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26886 MGI:1349448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268697 MGI:88302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc30a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69048 MGI:1916298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619865 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 1316 ESTs, 12 Proteins pseudo : _no_value

name	LOC619917 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	EG619937 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619937 MGI:3646295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 579 ESTs, 27 Proteins

name	4933416M06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71174 MGI:1918424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100039971 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins

name	LOC100039983 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Pik3r1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18708 MGI:97583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Naip5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107601 GeneID:17951 MGI:1298220
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NLR family, apoptosis inhibitory protein 5 transcript_id : NM_010870.2

name	Birc1f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107599 GeneID:17952 MGI:1298222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 1f transcript_id : NM_010871.2

name	Naip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431261 GeneID:17940 MGI:1298223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NLR family, apoptosis inhibitory protein 1 transcript_id : NM_008670.2

name	Gtf2h2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381243 GeneID:23894 MGI:1345669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II H, polypeptide 2 transcript_id : NM_022011.3

name	Ocln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982140 GeneID:18260 MGI:106183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : occludin transcript_id : NM_008756.2

name	Marveld2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362991 GeneID:218518 MGI:2446166
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MARVEL (membrane-associating) domain containing 2 transcript_id : NM_001038602.2

name	Marveld2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341532 GeneID:218518 MGI:2446166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MARVEL (membrane-associating) domain containing 2 transcript_id : NM_178410.2

name	Rad17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199778 GeneID:19356 MGI:1333807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD17 homolog (S. pombe) transcript_id : NM_001044371.1

name	Rad17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199764 GeneID:19356 MGI:1333807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD17 homolog (S. pombe) transcript_id : NM_011233.2

name	Taf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373000 GeneID:108143 MGI:1888697
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_027139.4

name	Taf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28076974 GeneID:108143 MGI:1888697
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_027592.1

name	Taf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62821771 GeneID:108143 MGI:1888697
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_001015889.1

name	Ccdc125 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62530189 GeneID:76041 MGI:1923291
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 125 transcript_id : NM_183115.3

name	Cdk7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802241 GeneID:12572 MGI:102956
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase) transcript_id : NM_009874.2

name	Mrps36 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381960 GeneID:66128 MGI:1913378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S36 transcript_id : NM_025369.2

name	Cenph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11230783 GeneID:26886 MGI:1349448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein H transcript_id : NM_021886.1

name	Ccnb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130025 GeneID:268697 MGI:88302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin B1 transcript_id : NM_172301.3

name	Slc30a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67763825 GeneID:69048 MGI:1916298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 30 (zinc transporter), member 5 transcript_id : NM_022885.2

name	EG619937 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264660 GeneID:619937 MGI:3646295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 579 ESTs, 27 Proteins product : predicted gene, EG619937 transcript_id : XM_884320.3

name	4933416M06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264644 GeneID:71174 MGI:1918424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 4933416M06 gene transcript_id : XM_001473850.1

name	LOC100039971 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264647 GeneID:100039971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001473875.1

name	Pik3r1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117320523 GeneID:18708 MGI:97583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) transcript_id : NM_001077495.1

name	Pik3r1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299808 GeneID:18708 MGI:97583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) transcript_id : NM_001024955.1

name	Naip5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107602 CCDS:CCDS26727.1 GeneID:17951 MGI:1298220
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : neuronal apoptosis inhibitory protein, related sequence 3; neuronal apoptosis inhibitory protein 5 product : baculoviral IAP repeat-containing 1e protein_id : NP_035000.2

name	Birc1f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107600 CCDS:CCDS26728.1 GeneID:17952 MGI:1298222
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : neuronal apoptosis inhibitory protein, related sequence 4; neuronal apoptosis inhibitory protein 6 product : baculoviral IAP repeat-containing 1f protein_id : NP_035001.2

name	Naip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114431262 CCDS:CCDS26729.1 GeneID:17940 MGI:1298223
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : neuronal apoptosis inhibitory protein 1 product : baculoviral IAP repeat-containing 1a protein_id : NP_032696.2

name	Gtf2h2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981225 CCDS:CCDS26730.1 GeneID:23894 MGI:1345669
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : basal transcription factor 2, p44 subunit; general transcription factor IIH, polypeptide 2 (44 kDa subunit); general transcription factor II H, polypeptide 2 (44 kDa subunit) product : general transcription factor II H, polypeptide 2 protein_id : NP_071294.2

name	Ocln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679162 CCDS:CCDS26731.1 GeneID:18260 MGI:106183
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0005923 - tight junction [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 product : occludin protein_id : NP_032782.1

name	Marveld2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370242 CCDS:CCDS26732.1 GeneID:218518 MGI:2446166
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; tricellulin product : MARVEL (membrane-associating) domain containing 2 isoform 1 protein_id : NP_001033691.1

name	Marveld2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30410734 GeneID:218518 MGI:2446166
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; tricellulin product : MARVEL (membrane-associating) domain containing 2 isoform 2 protein_id : NP_848497.1

name	Rad17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199779 GeneID:19356 MGI:1333807
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IMP] codon_start : 1 product : RAD17 homolog protein_id : NP_001037836.1

name	Rad17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199765 CCDS:CCDS26733.1 GeneID:19356 MGI:1333807
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IMP] codon_start : 1 product : RAD17 homolog protein_id : NP_035363.2

name	Taf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076975 CCDS:CCDS26734.1 GeneID:108143 MGI:1888697
definition	GO_component : GO:0005669 - transcription factor TFIID complex [Evidence ISS] GO_function : GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0019201 - nucleotide kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32 kDa product : TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 2 protein_id : NP_081868.1

name	Taf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62821772 CCDS:CCDS26735.1 GeneID:108143 MGI:1888697
definition	GO_component : GO:0005669 - transcription factor TFIID complex [Evidence ISS] GO_function : GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0019201 - nucleotide kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 3; TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32 kDa product : TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 1 protein_id : NP_001015889.1

name	Taf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18079237 CCDS:CCDS26735.1 GeneID:108143 MGI:1888697
definition	GO_component : GO:0005669 - transcription factor TFIID complex [Evidence ISS] GO_function : GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0019201 - nucleotide kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32 kDa product : TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 1 protein_id : NP_081415.1

name	Ccdc125 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55742872 CCDS:CCDS26736.1 GeneID:76041 MGI:1923291
definition	codon_start : 1 exception : mismatches in translation product : coiled-coil domain containing 125 protein_id : NP_898938.2

name	Cdk7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859522 GeneID:12572 MGI:102956
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004693 - cyclin-dependent protein kinase activity [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : CRK4 PK (CDC2-related-kinase-4 protein kinase) product : cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase) protein_id : NP_034004.1

name	Mrps36 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384742 GeneID:66128 MGI:1913378
definition	GO_component : GO:0005763 - mitochondrial small ribosomal subunit [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] GO_process : GO:0006412 - protein biosynthesis [Evidence ISS] codon_start : 1 product : mitochondrial ribosomal protein S36 protein_id : NP_079645.1

name	Cenph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11230784 CCDS:CCDS26738.1 GeneID:26886 MGI:1349448
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0000776 - kinetochore [Evidence IDA] [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0043515 - kinetochore binding [Evidence IDA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007059 - chromosome segregation [Evidence ISS]; GO:0051383 - kinetochore organization and biogenesis [Evidence TAS]; GO:0007067 - mitosis [Evidence ISS] codon_start : 1 product : centromere autoantigen H protein_id : NP_068686.1

name	Ccnb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28195398 GeneID:268697 MGI:88302
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : cyclin B1, related sequence 13; G2/mitotic-specific cyclin B1 product : cyclin B1 protein_id : NP_758505.2

name	Slc30a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67763826 CCDS:CCDS26739.1 GeneID:69048 MGI:1916298
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0030141 - secretory granule [Evidence ISS] GO_function : GO:0005385 - zinc ion transporter activity [Evidence ISS] GO_process : GO:0006824 - cobalt ion transport [Evidence ISS]; GO:0006829 - zinc ion transport [Evidence ISS] codon_start : 1 note : zinc transporter 5; zinc transporter like 1 product : solute carrier family 30 (zinc transporter), member 5 protein_id : NP_075023.2

name	EG619937 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82952271 GeneID:619937 MGI:3646295
definition	codon_start : 1 product : similar to high-mobility group box 1 protein_id : XP_889413.1

name	4933416M06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264645 GeneID:71174 MGI:1918424
definition	codon_start : 1 product : hypothetical protein LOC71174 protein_id : XP_001473900.1

name	LOC100039971 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264648 GeneID:100039971
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473925.1

name	Pik3r1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117320524 GeneID:18708 MGI:97583
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IDA]; GO:0005942 - phosphoinositide 3-kinase complex [Evidence TAS]; GO:0035030 - phosphoinositide 3-kinase complex, class IA [Evidence ISS] GO_function : GO:0043125 - ErbB-3 class receptor binding [Evidence ISS]; GO:0005158 - insulin receptor binding [Evidence ISS]; GO:0043560 - insulin receptor substrate binding [Evidence IPI]; GO:0005159 - insulin-like growth factor receptor binding [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence TAS]; GO:0035014 - phosphoinositide 3-kinase regulator activity [Evidence ISS] [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0008286 - insulin receptor signaling pathway [Evidence ISS]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0046854 - phosphoinositide phosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 isoform 2 protein_id : NP_001070963.1

name	Pik3r1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68299809 CCDS:CCDS26740.1 GeneID:18708 MGI:97583
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IDA]; GO:0005942 - phosphoinositide 3-kinase complex [Evidence TAS]; GO:0035030 - phosphoinositide 3-kinase complex, class IA [Evidence ISS] GO_function : GO:0043125 - ErbB-3 class receptor binding [Evidence ISS]; GO:0005158 - insulin receptor binding [Evidence ISS]; GO:0043560 - insulin receptor substrate binding [Evidence IPI]; GO:0005159 - insulin-like growth factor receptor binding [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence TAS]; GO:0035014 - phosphoinositide 3-kinase regulator activity [Evidence ISS] [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0008286 - insulin receptor signaling pathway [Evidence ISS]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0046854 - phosphoinositide phosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 isoform 1 protein_id : NP_001020126.1

name	LOC667861 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667861
definition	number : 2 pseudo : _no_value

name	LOC667861 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667861
definition	number : 1 pseudo : _no_value

name	LOC619917 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619917
definition	number : 3 pseudo : _no_value

name	LOC619917 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619917
definition	number : 2 pseudo : _no_value

name	LOC619917 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619917
definition	number : 1 pseudo : _no_value

name	LOC100039983 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039983
definition	number : 1 pseudo : _no_value

name	LOC100039983 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039983
definition	number : 2 pseudo : _no_value

name	EG667838 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264657 GeneID:667838 MGI:3643711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins product : predicted gene, EG667838 pseudo : _no_value transcript_id : XR_002085.2

name	LOC619865 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264659 GeneID:619865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 1316 ESTs, 12 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_032060.1

clone name	MSMg01-508K12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-389J18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-528P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150M17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-380I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169F23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-439I05.T7 (MSMg01no439_i05.b1)	MSMg01-439I05.TJ (MSMg01no439_i05.g1)
ACC	AG529848	AG529849
length	754	800
length of high quality (start - end)	270 (66 - 335)	231 (73 - 303)
definition	CHROMAT_FILE: MSMg01no439_i05.b1 PHD_FILE: MSMg01no439_i05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:05:39 2005	CHROMAT_FILE: MSMg01no439_i05.g1 PHD_FILE: MSMg01no439_i05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:05:39 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGA ATTCTGCCAATTCTTTCCCTCAGCCTCCTTTCTGAGGAGACTTTTTTTCA TCATCCAAAGCCCTGATTAGAATAAAACTAACAGCTCGTTTAAAGGGCAA TCATTTCCCACTCCAATGGCTTCTGCTCTGACAATGAGAAGAAGAGAGTC AGAATGGGAGTCCTGCCTGATGCAGGCTGTTTTCAGTCTTCTCCAATTTA TAGACCCAGGTTTAACCTAATTCTCATGATGAAAGATTCAGAGGCTGGGC GCTGGGGGATGATTGTTTTTTGAGTGTGGGGCTGNNNNANANGGNANNNN NCNATTTTTTACCACTTCTCTCTCTTTTCAACACCTCTTCCACTTTGTTT CCACCGATTTATAAGACCCCCACCTGAATAATTTAAAAGTTTTAGATATA GCATCATATTTACCTTCACCTCTTCCTTAGCTTTTTTTCCGTTTTTGTAA GTTTGTTGAACCACGCCTCTCTTTATTATATATTACGCCGTATTCTTCTC TACATAATTCGTATTCCCCCCCCCCCTCCTTCTGGCGAGGTTTACCTACT CTTCCCTTTCCGCGGTTTTCTTTTATCTTTCTTTTTTACCCCCCCCCCCC CAACTTTTTTCTTCCTTTCCCCCCCACCGCCCCCCTACACGATCTTCGCC CTTTTTTCTCTTTTTCCCCTCTCGCACAAATGGCGGACGTCCCAATAACT TATN	ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXTACCTCTTTTGCAGTTTTCCATATTTCT TTAAGTGAGTTATGAAAGTTCTTCTGGATGTCCTCTACCATCATCATGAG ATATGTGTTTAAATACAAGCCTAGCTTTTCAGGTGTTTTAGGGTATCCAG GAGAGGCTGAGGTGGGAGTGCTGGGTTCTGATGATGGTGAGTGGTTTTGT TTTCTATTAGTAAGATTCTTACATTTGCCTTTCGCCATCTGGTAATCTCT GGAGCTAGTTGTCAGTGCATTCTCTGGANGGAGCTTATTCCGCCCAAGAC CCTGTTTTTCTCCGCCCTCTGACTTGGGAGACTAGTTTTCTTTTGAGTTT CCGTGGTCAGAGACCCCTCTTCTGGATAGCCCTCTTCCCGCCTTCCCCGC TGCCCTTCACTTTATTGGCGCTTATACCCTCGCTCCTTTTTTCCTCGCTT CGTGCCTTGTTCAATCTGCTCCTGGTTTTCGCGTTTTTCCTTTCTCCGCC TCCTCTTACATTATTTCCCCCTTTATCACATTCGCGACACCTTTTTATTG GTTCCCATGTTTCCTTTTTCCCGCTTCCCCCCCCCCTTGTTTTCGCCCTT TCTTTTTTCTCCTTATCCCCTTTCCCCCTTTTCTTTTTTTTTTTTTTCTT TCCCCTAATTTCCTTTTTCCCCCCTATTTTTCCTTGTTTTATCGCCTGTC TTTCCGTGCTTTCCTCGTCTGTTCTCTGTTTTCTCTCCCCATTTCTCCTT
quality values	Open. Hide. 8 10 8 10 12 11 15 18 35 36 37 37 32 31 31 37 22 23 20 24 24 28 39 41 27 20 20 15 14 7 11 6 6 6 6 6 6 11 13 20 18 11 11 11 20 18 33 41 31 31 31 31 31 30 25 21 10 6 6 6 6 6 6 6 9 15 24 36 28 30 25 30 29 33 43 59 59 59 59 59 57 57 53 53 53 50 57 57 57 57 57 57 57 68 68 68 51 51 42 42 42 47 53 51 51 50 50 50 51 59 59 59 57 47 50 47 48 42 41 41 41 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 51 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 50 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 50 59 50 48 47 47 47 27 27 12 15 14 18 19 14 14 12 23 22 28 30 59 34 34 28 28 28 22 22 3 0 0 0 0 3 0 3 0 3 3 0 3 0 0 0 0 0 3 0 3 15 23 21 24 16 11 10 8 8 6 6 8 8 10 16 16 16 14 16 22 22 13 10 8 8 8 8 9 10 17 11 10 10 8 8 10 10 10 8 10 10 8 8 10 11 9 8 8 8 8 8 10 10 10 8 8 10 10 10 10 11 12 12 19 15 10 10 10 11 17 10 8 8 8 8 8 8 10 10 10 10 11 9 9 11 11 8 8 11 11 10 10 12 11 8 8 10 10 8 8 8 8 8 9 10 15 10 9 9 9 10 9 9 11 12 10 23 10 9 9 11 8 8 6 6 8 8 8 8 8 11 13 8 8 8 8 8 8 12 16 16 10 10 10 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 8 8 9 9 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 9 9 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 12 8 15 15 12 12 10 19 15 15 14 14 14 21 16 10 10 8 8 8 8 8 8 8 10 8 11 8 8 8 8 8 8 9 15 15 13 12 9 10 10 8 8 8 10 8 8 8 8 8 9 16 16 10 10 10 15 14 9 8 8 8 6 8 9 9 10 10 10 9 8 8 8 8 10 15 20 40 28 15 8 8 8 8 10 10 8 8 8 8 8 8 11 14 10 8 8 8 8 8 8 8 9 8 8 13 23 19 13 10 10 10 10 10 8 8 8 8 8 8 9 10 9 10 10 10 8 10 11 7 7 6 6 6 8 8 8 8 8 10 22 16 12 10 10 9 11 11 14 14 14 9 15 19 13 13 13 8 8 8 8 8 8 9 9 9 9 9 11 9 8 8 8 8 8 8 8 10 10 10 10 8 8 8 8 8 10 3 0	Open. Hide. 12 15 9 9 9 9 23 15 30 32 36 32 29 29 37 29 37 37 37 37 37 39 39 41 44 34 23 24 9 9 7 6 6 7 6 6 8 8 22 22 24 18 18 41 30 33 36 33 33 39 42 47 47 33 27 8 6 6 6 8 8 9 9 10 18 14 14 14 23 23 33 33 48 59 53 57 59 59 59 59 59 57 57 57 57 57 57 59 59 48 53 48 54 54 54 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 57 57 46 57 43 43 43 43 46 57 57 57 57 50 50 50 50 50 50 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 51 51 50 50 50 50 50 50 68 57 57 59 50 48 48 57 57 43 43 44 57 47 54 57 57 57 57 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 57 57 54 54 54 54 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 48 48 43 48 48 59 59 59 48 48 48 57 48 50 53 50 50 50 44 39 37 43 41 41 36 41 23 23 11 12 13 18 11 11 18 25 30 47 47 47 59 59 59 48 47 47 43 43 40 40 40 39 39 39 47 39 39 43 42 47 43 43 43 48 59 59 48 48 48 59 57 57 43 39 43 39 37 37 37 41 37 37 46 43 41 16 15 8 8 8 10 13 18 9 12 9 9 9 9 6 6 6 6 6 6 12 17 41 23 15 8 3 0 3 17 19 22 20 24 26 30 37 15 15 9 10 12 17 15 9 9 9 8 8 8 8 9 9 15 19 17 17 19 17 20 20 20 12 10 10 8 10 8 9 10 11 16 16 13 11 11 18 13 12 8 8 8 8 11 15 16 16 11 11 10 11 11 11 11 11 11 16 17 12 11 10 12 9 9 10 10 12 8 8 9 9 9 8 10 10 10 9 8 8 8 11 11 11 11 12 15 12 11 12 11 10 10 10 10 10 9 10 10 10 10 8 8 8 8 8 8 8 8 10 10 10 10 13 12 12 12 12 10 8 10 11 11 11 9 10 8 8 8 8 8 10 10 8 8 8 8 10 8 8 7 7 10 10 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 10 8 8 8 8 8 7 7 8 11 9 10 9 9 9 12 9 13 8 8 8 8 8 8 8 8 8 12 9 11 9 10 9 9 9 15 12 13 15 15 10 10 10 8 8 6 6 6 6 9 10 10 8 8 8 8 8 8 6 8 6 6 6 6 6 10 9 9 9 10 8 11 11 12 18 12 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 12 10 13 10 10 9 8 7 8 9 8 8 8 8 9 9 10 12 18 19 14 13 15 15 17 23 19 10 10 8 8 8 8 8 8 8 13 15 23 19 15 8 8 10 11 8 8 8 11 11 10 8 8 8 8 9 8 8 8 8 8 8 10 11 13 9 9 12 19 15 12 8 8 8 10 13 20 24 19 14 12 12 12 12 18 12 11 11 19 22 15 12 12 17 15 15 15 27 30 30 27 31 24 22 14 12 12 12 12 12 19 14 12 8 8 6 6 6 10 12 15 13 10 10 9 9 9 9 12 11 11 8 8 8 8 10 10 10 8 8 8 10 6 6 6 8 10 10 10 10 9 9 9 10 10 9 9 9 10 12 10 10 6 6 6 6 8 8 13 8 9 9 6 6 6 6 11 6 8 8 8 14 11 12 11 12 15 28 28 28 23 18 10 10 9 13 14 11 11 6 12 6 6 6 8 10 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no439_i05.b1 MSMg01no439_i05.b1 CHROMAT_FILE:
MSMg01no439_i05.b1 PHD_FILE: MSMg01no439_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:39 2005
         (270 letters)



>mm_chr13_101987045_101987713
          Length = 669

 Score =  460 bits (238), Expect = e-134
 Identities = 247/250 (98%), Gaps = 1/250 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccctcagcctcctttctgaggagactttttttcatcatccaaagccctgattagaataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctcagcctcctttctgaggagactttttttcatcatccaaagccctgattagaataa 260

                                                                       
Query: 61  aactaacagctcgtttaaagggcaatcatttcccactccaatggcttctgctctgacaat 120
           |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 261 aactaacagctcgtttaaagggtaatcatt-cccactccaatggcttctgctctgacaat 319

                                                                       
Query: 121 gagaagaagagagtcagaatgggagtcctgcctgatgcaggctgttttcagtcttctcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagaagaagagagtcagaatgggagtcctgcctgatgcaggctgttttcagtcttctcca 379

                                                                       
Query: 181 atttatagacccaggtttaacctaattctcatgatgaaagattcagaggctgggcgctgg 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atttatagacctaggtttaacctaattctcatgatgaaagattcagaggctgggcgctgg 439

                     
Query: 241 gggatgattg 250
           ||||||||||
Sbjct: 440 gggatgattg 449


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 669
Length adjustment: 9
Effective length of query: 261
Effective length of database: 660
Effective search space:   172260
Effective search space used:   172260
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information