Query= MSMg01no441_b13.b1 MSMg01no441_b13.b1 CHROMAT_FILE:
MSMg01no441_b13.b1 PHD_FILE: MSMg01no441_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:45 2005
(515 letters)
>mm_chr13_11879318_11880228
Length = 911
Score = 922 bits (477), Expect = 0.0
Identities = 504/515 (97%), Gaps = 4/515 (0%)
Strand = Plus / Plus
Query: 1 gagacccaggctcaatggtgaaagtgaaaagaggactggaagatgcatcttactgggaaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 gagacccaggctcaatggtgaaagtgaaaaaaggactggaagatgcatcttactgggaaa 260
Query: 61 gcacacagttccctgtagtacctgacaacatggagggcttgacctgtagtggaaagagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacacagttccctgtagtacctgacaacatggagggcttgacctgtagtggaaagagcc 320
Query: 121 tctgtgacgttaaacgaaactagatttaaccaatgtgttatgagaactatttcattctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtgacgttaaacgaaactagatttaaccaatgtgttatgagaactatttcattctgt 380
Query: 181 tgttaaaacacataactaggagttgctggaaaccatttgtctgaggtcatcttatgatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tgttaaaacacataactaggagttgctggaaaccatttgtctgaggtcatcttatgacct 440
Query: 241 tgtgaaaaaccatcttgtttaagcacctgtccagtaaatggatgctgctgtgtggggatt 300
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tgtgaaaaaccatcttgtttaagcacctgtccagtaaatg----ctgctgtgtggggatt 496
Query: 301 cattttgtcttttgcataaactcttctttaatcttccaagcctataaccattccatttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cattttgtcttttgcataaactcttctttaatcttccaagcctataaccattccatttca 556
Query: 361 cactgaaacttttggtgaatgttgtccatggttctctggcaactgacacattgataacct 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cactgaaacttttggtgaattttgtccatggttctctggcaactgacacattgataacct 616
Query: 421 ttctccctggggattttatcccatggttcaatcttatatttaacatttatctatttcctt 480
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttctccctggtgattttagcccatggttcaatcttatatttaacatttatctatttcctt 676
Query: 481 ggcttttaatgaagccaagcaaggtgggtgactca 515
|| ||||||||||||||||||| ||||||||||||
Sbjct: 677 ggtttttaatgaagccaagcaaagtgggtgactca 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 911
Length adjustment: 10
Effective length of query: 505
Effective length of database: 901
Effective search space: 455005
Effective search space used: 455005
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_b13.g1 MSMg01no441_b13.g1 CHROMAT_FILE:
MSMg01no441_b13.g1 PHD_FILE: MSMg01no441_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:45 2005
(513 letters)
>mm_chr13_12044659_12045571
Length = 913
Score = 909 bits (470), Expect = 0.0
Identities = 482/486 (99%)
Strand = Plus / Minus
Query: 1 tgttcctggttattcaacagcagcagggagatgaatatgaaagtatgaggaaagatgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgttcctggttattcaacagcagcagggagatgaatatgaaagtatgaggaaagatgaat 427
Query: 61 aaaatatttagacttatgtttgaattcttcacaactttgaccatgctagtgttcctactt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaaatatttagatttatgtttgaattcttcacaactttgaccatgctagtgttcctactt 367
Query: 121 acacatagcagaagtccctatgaaggagaacttgaaggaggattctgtgtgtcaggggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acacatagcagaagtccctatgaaggagaacttgaaggaggattctgtgtgtcaggggct 307
Query: 181 actgtccagggctagcatactatagaagaaagtgcttttctctctgtgtgccccatgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 actgtccagggctagcatactatagaagaaagtgcttttctctctgtgtgccccatgcat 247
Query: 241 gtgagagccatatccaacatagatttggtcaaaattgctaaatcctgctgagcatggtag 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtgagagccacatccaacatagatttggtcaaaattgctaaatcctgctgagcatggtag 187
Query: 301 ttcacacctgttattccagagtttagggagaaagagctgaaaggatgtgaatttgagggt 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcacacctgttattccaaagtttagggagaaagagctgaaaggatgtgaatttgagggt 127
Query: 361 aacctgggctacatggtaagccctctagagctcaccctcccatctctcctcccattcctc 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aacctgggctccatggtaagccctctagagctcaccctcccatctctcctcccattcctc 67
Query: 421 ctcatcatctctcctgtgcatctgattctagattctctggttccaaaattaacccttcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ctcatcatctctcctgtgcatctgattctagattctctggttccaaaattaacccttcac 7
Query: 481 tttctg 486
||||||
Sbjct: 6 tttctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
