Query= MSMg01no441_n02.b1 MSMg01no441_n02.b1 CHROMAT_FILE:
MSMg01no441_n02.b1 PHD_FILE: MSMg01no441_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:45 2005
(455 letters)
>mm_chr13_23631180_23632034
Length = 855
Score = 864 bits (447), Expect = 0.0
Identities = 453/455 (99%)
Strand = Plus / Minus
Query: 1 gtctaactatagcaaagcactactattcttatagtcacaagctcaaggttttaaatttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtctaactatagcaaagcactactattcttatagtcacaagctcaaggttttaaatttcc 495
Query: 61 tttggttgtcttctaagtatagacttaaaggtacttgtgctaagaacgtctgtctggttt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 494 tttggttgtcttctaagtatagacttaaaggtacttatgctaagaacgtctgtctggttt 435
Query: 121 gtaaactcaggcactttcacagtttgtattcatactgaaaataaagagcaagtgagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtaaactcaggcactttcacagtttgtattcatactgaaaataaagagcaagtgagtttt 375
Query: 181 tgtttcctctgctcaaataaagatttctgcctttccctgagctctccttaaaaagtcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgtttcctctgctcaaataaagatttctgcctttccctgagctctccttaaaaagtcttg 315
Query: 241 atgcttttaaccaaaaactgtttctgaagctcccactgtgacacaaatatgtgagtctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atgcttttaaccaaaaactgtttctgaagctcccactgtgacacaaatatgtgagtctac 255
Query: 301 ttccttttctacagtgtgggtttcagtacagattacaaacaatggtaatgctagcatgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttccttttctacagtgtgggtttcagtacagattacaaacaatggtaatgctagcatgtc 195
Query: 361 taaggctctttgtaaacctaaaaaagtaaaataaaagatttaggaaatcaacttgaatcc 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 taagactctttgtaaacctaaaaaagtaaaataaaagatttaggaaatcaacttgaatcc 135
Query: 421 acctctcatgagtcaaatgtactccagataagtac 455
|||||||||||||||||||||||||||||||||||
Sbjct: 134 acctctcatgagtcaaatgtactccagataagtac 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_n02.g1 MSMg01no441_n02.g1 CHROMAT_FILE:
MSMg01no441_n02.g1 PHD_FILE: MSMg01no441_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:45 2005
(520 letters)
>mm_chr13_23461708_23462627
Length = 920
Score = 922 bits (477), Expect = 0.0
Identities = 510/521 (97%), Gaps = 2/521 (0%)
Strand = Plus / Plus
Query: 1 tctggtctggagaagaacttggattggctgttaaattctagagttagggtctgaggatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggtctggagaagaacttggattggctgttaaattctagagttagggtctgaggatgg 260
Query: 61 caattatgtattctggattcactaattcctgttttcagaatttgaagaatttctgcagct 120
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 caattatgtattctgaattcactaattcctgttttcagaatttgcagaatttctgcagct 320
Query: 121 tattttaaattaaaattttaagacaaaaaaatcccaccagtgtcattctaatatttaagt 180
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 321 tattttaaattaaaattttaagacaaaaaa-tcccaccagtgtcattcaaatatttaagt 379
Query: 181 tttttt-cttagacttattttctatgtaagggtgttttatcagcatatatgtgcacgtgg 239
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 tttttttcttagacttattttctatgtatgggtgttttatcagcatatatgtgcacgtgg 439
Query: 240 tgtgtgtgcgcgcactctaggaggatgtcagatcccctggaactggaataatgcatggtt 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtgtgcgcgcgcactctaggaggatgtcagatcccctggaactggaataatgcatggtt 499
Query: 300 tatgagctaccacgtgagcgctggctggaaaatgaaccagggtcatcagcaagagcaagt 359
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatgagctaccatgtgagtgctggctggaaaatgaaccagggtcatcagcaagagcaagt 559
Query: 360 ggtcttaaatgctgagccatctctctagccctaattttaatatttaaataactttttatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggtcttaaatgctgagccatctctctagccctaattttaatatttaaataactttttatt 619
Query: 420 aactgtttttagtgtaagatgtaccaaacacaattctaatcacactatagaatgagctgt 479
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 620 aactgtttttagtgtaagatgtaccaaacacaattcgaatcacactatagaatgagctgt 679
Query: 480 gtatgactatattaggaagaaatgtacacatgttattgcag 520
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 gtatggctatattaggaagaaatgtacacatgttattgcag 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
