Query= MSMg01no447_b14.b1 MSMg01no447_b14.b1 CHROMAT_FILE:
MSMg01no447_b14.b1 PHD_FILE: MSMg01no447_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:50 2005
(194 letters)
>mm_chr13_12563426_12564019
Length = 594
Score = 373 bits (193), Expect = e-108
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 cttgtttggttttgattctgggtggctcgagcagtcgcgtgcgtgaaagatgagatgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgtttggttttgattctgggtggctcgagcagtcgcgtgcgtgaaagatgagatgtgg 260
Query: 61 agcgaagtgaattgaaaggggcagtttccaacacagagcagctagatacactgcgtggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcgaagtgaattgaaaggggcagtttccaacacagagcagctagatacactgcgtggag 320
Query: 121 agatgtggggatcctagtgactctaggcaaacatgggcatccgtgtgtgtgtgtgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatgtggggatcctagtgactctaggcaaacatgggcatccgtgtgtgtgtgtgtgtgt 380
Query: 181 gtgtgtgtgtgtg 193
|||||||||||||
Sbjct: 381 gtgtgtgtgtgtg 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no447_b14.g1 MSMg01no447_b14.g1 CHROMAT_FILE:
MSMg01no447_b14.g1 PHD_FILE: MSMg01no447_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:50 2005
(445 letters)
>mm_chr13_13459990_13460834
Length = 845
Score = 785 bits (406), Expect = 0.0
Identities = 433/442 (97%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 4 atcttgatcggaaggcagcaggaggatgctgtgtgctaaattggatgtatcttgagcata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 atcttgatcggaaggcagcaggaggatgctgtgtgctaaattggatgtatcttgagcata 786
Query: 64 gcagaccccgaagcccaccaagtgctttggaggccacacttcctccaacaaggccacacc 123
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 785 gcagaccccgaagcccaccaagtgctttggaggccccacttcttccaacaaggccacacc 726
Query: 124 tcttaataagtgccactccctatgggccaagcattcaaacacaagagtctgtaggaaccg 183
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 725 tcttaataagtgccactccctatgggccaagcattgaaacacaagagtctgtgggaaccg 666
Query: 184 taacttttc-aaaccaccacagatgtcaagagaagtctgtaggagttcagcacagatgca 242
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 665 taacttttcaaaaccaccacagatgtcaagagaagtctgtaggtgttcagcacagatgca 606
Query: 243 attcagttgcttggtttcttggctggttgagtctgggacatggatacagtgaatatgggg 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 605 attcagttgcttggtttcttggctggttgagtctgggatatggatacagtgaatatgggg 546
Query: 303 gactgagcaatctgtcttcggtgacaaccttgtaaggcaggcatcacagttttagttttc 362
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gactgagcaatctgtcttcggcgacaaccttgtaaggcaggcatcacagttttagttttc 486
Query: 363 gaagatgaggctcaacaaagattgtattgtggcccctttacccatgctgagggtgatggg 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aaagatgaggctcaacaaagattgtattgtggcccctttacccatgctgagggtgatggg 426
Query: 423 gtagacatttgtgctccccccg 444
||||||||||||||||||||||
Sbjct: 425 gtagacatttgtgctccccccg 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
