NNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCCAGGTTTATCCAATTGGCTTCAGTATTCTTTCACTA
CAACAAAAAGTGAAACTGATAATATTGAGAATATCAATGAGTAGGCATAA
GGCAAGTATGGTTGTGTATTTCTGAACTCTCAGCACCATCGATACAGGAG
TAATAGGATTAGTATAGGTTCAAGGCTAGCCTGGTCTACATAGGAAGTTG
TAAAAAAGCTAGAGCTGAACAGTGAGACTTAACATTTTTAAAAATTCATT
GAATTTTCTTGAAGCAAATTCTTGAAATTATGGATATGATAATCATCTTT
GGCAGTGAAGGCAGGAATTAACAAGCAAAGTCGCCAGCTTTTCTTTACTG
TCTTGAGTCAGCTTTATTTGATTTTGCTTTTAAAGTCTCTAAGAGCTGAC
TTGAATTCCCCAATGCATTGTTTCAGAAGGTAATGGAGTTCACACACATT
CTCTGACTTCCACGTGGAGAACCGGCCAAGCATTACAGTTATACCAAAAT
GACCCACAATGGGGAAGGAATAAGACTACCCATATGCTACCTGAAAATGA
AAAGACACTGCTGATCAATTCAAAATAAAGAATTGACATCAATCAAAAAA
ATTGTCCTTTCAAAATCCAGCATGACACCATGTGCCCTAAACTGTACCTC
TGACTTTACCCTTAGCTTATATTGAGCATCACAATTTACAAAAATCATTT
CATTTTTAGAGTTGG

NTTTTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCTGTCTATCAGACTGTCT
TTGTCTATTTGATTTTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCCTCCTC
CCTCCCCCCCTCCCTCCCTCCCTCTCGCGCGCGCGCGAGCACTCGCTATG
TCTGTCCTTTTTTGTTTCGAGAACGTAGATGGTGTAATAGACAGGGGGGT
GTATTGCGCAGTGCAAACGACAGAGGGTTTTTTTTTTTGCGCGCGGGAAA
ACGGCGAGAGAGAGAGATTTTCTCCCCGCCGCGAGGAGGGTGGTGTGGAA
GATTCTCAGAAATTCAGGGTTCCAAGGAACGTGTTATATGGATAGGGGGG
AGCGTGGGAGCCGCGGAGGGAAGAGGAACATGCGTGCGCGGGGGGGGGGT
GTGGGCGAGCGTCGTGCATAGTTGGGGAGGGGGGGGGTTTAGGGCTTCAA
GGGATATTTTTTGGTGGATGGGCCCGACCTCTAGGGGTACGGGGTGGTGC
GTGGCCGTTTTTTTGGGGAGGTCCCTCAAAGAAGTTAATAAAAGGGGAGA
GGGTCGGCGGGGGTGGACAGGAAGGATATTGGGGTGTGGGTGTTTTGTTT
GTTGTGGGGGAGAGACGCCGGAGGCGTACTGTTGAGCGGTTGTTATCGGT
TTAATGGTGTTCCTGCGCGGGGTGCGGGCCTGGGCTTTTGT

Query= MSMg01no449_f21.b1 MSMg01no449_f21.b1 CHROMAT_FILE:
MSMg01no449_f21.b1 PHD_FILE: MSMg01no449_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:58 2005
         (601 letters)



>mm_chr13_87869629_87870629
          Length = 1001

 Score = 1123 bits (581), Expect = 0.0
 Identities = 593/597 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccaggtttatccaattggcttcagtattctttcactacaacaaaaagtgaaac 64
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccaggtttatagaattggcttcagtattctttcactacaacaaaaagtgaaac 264

                                                                       
Query: 65  tgataatattgagaatatcaatgagtaggcataaggcaagtatggttgtgtatttctgaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgataatattgagaatatcaatgagtaggcataaggcaagtatggttgtgtatttctgaa 324

                                                                       
Query: 125 ctctcagcaccatcgatacaggagtaataggattagtataggttcaaggctagcctggtc 184
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctctcagcaccatcgatataggagtaataggattagtataggttcaaggctagcctggtc 384

                                                                       
Query: 185 tacataggaagttgtaaaaaagctagagctgaacagtgagacttaacatttttaaaaatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacataggaagttgtaaaaaagctagagctgaacagtgagacttaacatttttaaaaatt 444

                                                                       
Query: 245 cattgaattttcttgaagcaaattcttgaaattatggatatgataatcatctttggcagt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattgaattttcttgaagcaaattcttgaaattatggatatgataatcatctttggcagt 504

                                                                       
Query: 305 gaaggcaggaattaacaagcaaagtcgccagcttttctttactgtcttgagtcagcttta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaggcaggaattaacaagcaaagtcgccagcttttctttactgtcttgagtcagcttta 564

                                                                       
Query: 365 tttgattttgcttttaaagtctctaagagctgacttgaattccccaatgcattgtttcag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 tttgattttgcttttaaagtctctaagagctgacttgaattccccaatgcagtgtttcag 624

                                                                       
Query: 425 aaggtaatggagttcacacacattctctgacttccacgtggagaaccggccaagcattac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaggtaatggagttcacacacattctctgacttccacgtggagaaccggccaagcattac 684

                                                                       
Query: 485 agttataccaaaatgacccacaatggggaaggaataagactacccatatgctacctgaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agttataccaaaatgacccacaatggggaaggaataagactacccatatgctacctgaaa 744

                                                                    
Query: 545 atgaaaagacactgctgatcaattcaaaataaagaattgacatcaatcaaaaaaatt 601
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgaaaagacactgctgatcaattcaaaataaagaattgacatcaatcaaaaaaatt 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)