Query= MSMg01no449_h14.b1 MSMg01no449_h14.b1 CHROMAT_FILE:
MSMg01no449_h14.b1 PHD_FILE: MSMg01no449_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:06 2005
(534 letters)
>mm_chr13_61399059_61399992
Length = 934
Score = 642 bits (332), Expect = 0.0
Identities = 350/356 (98%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 1 taagacatgatggctactatagtttaagcacttcactaatttctatttgattcccataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 taagacatgatggctactatagtttaagcacttcactaatttctatttgattcccataag 297
Query: 61 agtttgattttgtttaatagttgcacaaaatatattgaaaaaaggtttaagttcaacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtttgattttgtttaatagttgcacaaaatatattgaaaaaaggtttaagttcaacact 237
Query: 121 agtgtctgtcttcctttaattttgaaaagtagtgacttttttaattaata-tttttatta 179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 236 agtgtctgtcttcctttaattttgaaaagtagtgacttttttaattaatattttttatta 177
Query: 180 catattttcctcaattacatttccaatgctaccccaaaagccccccacactctccccccc 239
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 176 catattttcctcaattacatttccaatgctatcccaaaagccccccacaccctccccccc 117
Query: 240 acttccctaccctttcattcccattttttttggccctggcgttcccctgtactggggcat 299
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 acttccctacccactcattcccattttttttggccctggcgttcccctgtactggggcat 57
Query: 300 atacagtttgcatgtccaatgggcctctctttccagtgatggccgactaggccatc 355
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 56 atacagtttgcatgtccaatgggcctctctttccagtgatggccgactatgccatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_h14.g1 MSMg01no449_h14.g1 CHROMAT_FILE:
MSMg01no449_h14.g1 PHD_FILE: MSMg01no449_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:06 2005
(290 letters)
>mm_chr13_61228497_61229186
Length = 690
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 1 cttcctggtggcatatttctatctcatatgcactaccttatttttaatcacacaaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcctggtggcatatttctatctcatatgcactaccttatttttaatcacacaaaatac 260
Query: 61 tttctaaattgaccaaaatggtttttaacttatgttccttaccattatggaatcaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctaaattgaccaaaatggtttttaacttatgttccttaccattatggaatcaaaatt 320
Query: 121 cccagatgtattgactatagactttctgaaaacagaatttattaagttgtggcatatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccagatgtattgactatagactttctgaaaacagaatttattaagttgtggcatatcct 380
Query: 181 ttgtatccctaatctctccaaggacttctaccatgaagggatgttggattttgtcaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtatccctaatctctccaaggacttctaccatgaagggatgttggattttgtcaaaga 440
Query: 241 ccttttctctatttaataagaagatttttttctttctgttgtttttttat 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttttctctatttaataagaagatttttttctttctgttgtttttttat 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
