Query= MSMg01no449_k04.b1 MSMg01no449_k04.b1 CHROMAT_FILE:
MSMg01no449_k04.b1 PHD_FILE: MSMg01no449_k04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:18 2005
(416 letters)
>mm_chr13_45618269_45619083
Length = 815
Score = 727 bits (376), Expect = 0.0
Identities = 406/416 (97%), Gaps = 1/416 (0%)
Strand = Plus / Minus
Query: 1 aaagaaagttaccacagaggcgactgacaggagcatcaggtgtaactaggtactcatggg 60
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 615 aaagaaagttaccacagaggcgactgaaaggagcatcaggtggaactaggtactcatggg 556
Query: 61 tggcactgggcacaagaagggacagcaacttcaccatgccctggtacaggccttcccaat 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tggcgctgggcacaagaagggacagcaacttcaccatgccctggtacaggccttcccaat 496
Query: 121 tagaaacgaaggcactgttccccctctgatcctgcccagtggcaggtgatcatgggcaaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tagaaacgaaggcactgtt-cccctctgatcctgcccagtggcaggtgatcatgggcaaa 437
Query: 181 caagtctaaatgtgccacgtaagggatggtctttatcttcagagctcccttgcttcccaa 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 436 caagtctaaatgtgccacgtaagggatggtctttatcttcagggctcccttgcttcccaa 377
Query: 241 aggatgtttttttttttgtgttaatttggtgttataataagtccccacacctaagagcaa 300
|||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 376 aggaggttttatattttgtgttaatgtggtgttataataagtccccacacctaagagcaa 317
Query: 301 atcagggtgtctgcagtaaatgtgggataaccgctcctagtctttactgagatgctggga 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 316 atcagggtgtctgcagtaaatgtgggataaccgcttctagtctttactgagatgctggga 257
Query: 361 acgagagaagggactgacctctccctgaaatactcggagtatttttggacatacaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acgagagaagggactgacctctccctgaaatactcggagtatttttggacatacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 815
Length adjustment: 9
Effective length of query: 407
Effective length of database: 806
Effective search space: 328042
Effective search space used: 328042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_k04.g1 MSMg01no449_k04.g1 CHROMAT_FILE:
MSMg01no449_k04.g1 PHD_FILE: MSMg01no449_k04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:18 2005
(446 letters)
>mm_chr13_45444325_45445170
Length = 846
Score = 816 bits (422), Expect = 0.0
Identities = 440/446 (98%)
Strand = Plus / Plus
Query: 1 actactcagttaaaaataatttaaggcatgcttgagaacagagtcctaaaaacataaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actactcagttaaaaataatttaaggcatgcttgagaacagagtcctaaaaacataaaga 260
Query: 61 gagggtacaacctacccagttctgggatcttccaggtggcatttcttaaaagccagtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagggtacaacctacccagttctgggatcttccaggtggcatttcttaaaagccagtgag 320
Query: 121 ttcaaatttgttgttagaaatgcatttgtatgccacataaattcgccccctaaaaggagc 180
||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ctcaaaattgttgttagaaaggcatttgtatgccacagaaattcgccccctaaaaggagc 380
Query: 181 ttccaggtgattgagagcccagatgagacacttgtttacctctgatccagagcaggaaga 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccgggtgattgagagcccagatgagacacttgtttacctctgatccagagcaggaaga 440
Query: 241 gaggcaatcactctgtctttgaacctaaggagtcattaacaaaacaactgttgaaaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggcaatcactctgtctttgaacctaaggagtcattaacaaaacaactgttgaaaatta 500
Query: 301 aacactcacttgtgaggaatcccaagggagaatccaggcagcctccacctagtacacacc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 aacactcacttgtgaggaatcccaagggagaatccaggcagcctccacctagtacacatc 560
Query: 361 agtacatgtgatcaactgcacctaaatggctgctgctgctggccgggcatccttccaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtacatgtgatcaactgcacctaaatggctgctgctgctggccgggcatccttccaatg 620
Query: 421 tgtgttgactttagtccacaggactc 446
||||||||||||||||||||||||||
Sbjct: 621 tgtgttgactttagtccacaggactc 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
