Query= MSMg01no450_a17.b1 MSMg01no450_a17.b1 CHROMAT_FILE:
MSMg01no450_a17.b1 PHD_FILE: MSMg01no450_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:50 2005
(494 letters)
>mm_chr13_84613348_84614241
Length = 894
Score = 832 bits (430), Expect = 0.0
Identities = 466/494 (94%), Gaps = 26/494 (5%)
Strand = Plus / Minus
Query: 1 gtttcattttatcagttgtgactgctcagtgacaattttattctctctctctctctctct 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 678 gtttcattttatcagttgtgactgctcagtgacaattttat--tctctctctctctctct 621
Query: 61 ctctctctctctctctctctctctctctctctctccttcccttcttttctccctccctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctctctctctctctctctctctctctctctctctccttcccttcttttctccctccctcc 561
Query: 121 tcaaccactccctccctacctacaatgagtttagaaatttaggttaaaaatatttgagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaaccactccctccctacctacaatgagtttagaaatttaggttaaaaatatttgagtt 501
Query: 181 caaccaaagaaatataagcagtggcttggcaaaggaggctaacaagtggaaattcttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caaccaaagaaatataagcagtggcttggcaaaggaggctaacaagtggaaattcttgac 441
Query: 241 ttaatcttcatgaagccctcattcataagagccaatgtttcattttattttggttctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttaatcttcatgaagccctcattcataagagccaatgtttcattttattttggttctggg 381
Query: 301 atagaatctgtggattcaaatgtcaggaaaacactctgcagctaaatggtatccacacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atagaatctgtggattcaaatgtcaggaaaacactctgcagctaaatggtatccacacac 321
Query: 361 caattaattaattaattaattaattaattaattaattaattaattaattataggcacaat 420
| |||||||||||||||||||||||||||| ||||||
Sbjct: 320 c------------------------aattaattaattaattaattaattatagacacaat 285
Query: 421 ttctatgtgtagcactgagtgccctgggaatctgtaaactagactatccttcagctcaca 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttctatgtgtagcactgggtgccctgggaatctgtaaactagactatccttcagctcaca 225
Query: 481 gagatccacctcct 494
||||||||||||||
Sbjct: 224 gagatccacctcct 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_a17.g1 MSMg01no450_a17.g1 CHROMAT_FILE:
MSMg01no450_a17.g1 PHD_FILE: MSMg01no450_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:50 2005
(537 letters)
>mm_chr13_84453136_84454073
Length = 938
Score = 1009 bits (522), Expect = 0.0
Identities = 534/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 1 ataaacattttctgagccatcacataattaaaaatactcctatggtatatgactttattc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ataaacattttctgagccatcacataattaaaaatattcctatggtatatgactttattc 260
Query: 61 agaaaaataaaactaagtgattttcttatgtggttcactcctcatattcacagatcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaaataaaactaagtgattttcttatgtggttcactcctcatattcacagatcttca 320
Query: 121 aatagcttgaagattcagatttaaagatatgtagtctctcagccccttctcttcttacta 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagcttgaagattcagatttaaggatatgtagtctctcagccccttctcttcttacta 380
Query: 181 tgcactatgctgtttacaagcaacataggccctgacacttgcttagaaagctgatgtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcactatgctgtttacaagcaacataggccctgacacttgcttagaaagctgatgtcaa 440
Query: 241 cattttctttcattagactagtaaatgtttttactcatttgaattttcttcctatagaag 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttcctttcattagactagtaaatgtttttactcatttgaattttcttcctatagaag 500
Query: 301 aaaagcaaggttcaggctttaagtctgtcttctgtttctctattcttaatagagtagata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaagcaaggttcaggctttaagtctgtcttctgtttctctattcttaatagagtagata 560
Query: 361 gtctataatcttccattcttttttttt-ccattttgcatttcttccatataaccttttct 419
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 gtctataatcttccattcttttttttttccattttgcatttcttccatataaccttttct 620
Query: 420 atttggcaaaagacagtttattttcttgaatgaactaacatgattttgcagaaatactaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttggcaaaagacagtttattttcttgaatgaactaacatgattttgcagaaatactaa 680
Query: 480 tgtaataataaaaatagctcattcaatttcagactgtaattagccattttcttttttt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtaataataaaaatagctcattcaatttcagactgtaattagccattttcttttttt 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 938
Length adjustment: 10
Effective length of query: 527
Effective length of database: 928
Effective search space: 489056
Effective search space used: 489056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
