Query= MSMg01no451_a16.b1 MSMg01no451_a16.b1 CHROMAT_FILE:
MSMg01no451_a16.b1 PHD_FILE: MSMg01no451_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:09 2005
(667 letters)
>mm_chr13_7691170_7692236
Length = 1067
Score = 1191 bits (616), Expect = 0.0
Identities = 648/664 (97%), Gaps = 10/664 (1%)
Strand = Plus / Plus
Query: 6 aattctcacaatttgatgttgtataaggccatgatttatgctgcaggcaaaatgagagca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattctcacaatttgatgttgtataaggccatgatttatgctgcaggcaaaatgagagca 265
Query: 66 agcaaagttctgttactaaaagctgctaccccttttcccagtaaaccttctactatttga 125
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agcaaagttctgtcactaaatgctgctaccccttttcccagtaaaccttctactatttga 325
Query: 126 tcatgggtgtaatgattctgctgaatgcaagatataatattgtatatgagcagataactc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcatgggtgtaatgattctgctgaatgcaagatataatattgtatatgagcagataactc 385
Query: 186 caagcagaacataaaatttatatatgtacttacacagagaaagaaagacacacacacaga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 caagcagaacataaaatttatatatgtacttacacagagaaagaaagacacacacacaga 445
Query: 246 aacagagacaaacagagacagagagacagacagagacagggacaaagagacaaaaatgag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aacagagacaaacagagacagagagacagacagagacagggacaaagagacaaaaatgag 505
Query: 306 agaaagagagatatagaaagtaaagacagagagacagagagagaaagagagagagaaaga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agaaagagagatatagaaagtaaagacagagagacagagagagaaagagagagagaaaga 565
Query: 366 gagataaagaaattcacagagagagcatgtgagaaaggacatacagaaagagacagagac 425
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 566 gagataaagaaattcacagagagagcatgtgagaaagaacatacagaaagagacagagac 625
Query: 426 agagagagagacagagacagagagacagagagacagagagagagagagagacagagagtg 485
||||||||| ||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 626 agagagagatacagagacagagagacaaagagacagagagaga--------cagagagtg 677
Query: 486 --agaaaaagagagatacatgtatatatgaagtaacaaactgaagcatgtaaaacaatcc 543
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 678 taagaaaaagagagatacatgtatatatgaagtaacaaactgaagcatgtaaaataatcc 737
Query: 544 ttcatatatctgacccatctcactgttttctcagaaagaacagcctaggaaatgatttga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttcatatatctgacccatctcactgttttctcagaaagaacagcctaggaaatgatttga 797
Query: 604 agaacaaatccacatgtaatgacttttagtatattttaatttccttaataaaatattgag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 agaacaaatccacatgtaatgacttttagtatattttaatttccttaataaaatattgag 857
Query: 664 gatc 667
||||
Sbjct: 858 gatc 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_a16.g1 MSMg01no451_a16.g1 CHROMAT_FILE:
MSMg01no451_a16.g1 PHD_FILE: MSMg01no451_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:09 2005
(628 letters)
>mm_chr13_7775817_7776846
Length = 1030
Score = 1199 bits (620), Expect = 0.0
Identities = 627/630 (99%), Gaps = 2/630 (0%)
Strand = Plus / Minus
Query: 1 tctacctttgtgtttgctctgatgaatggtatctttcaaccacccttcactgccatagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tctacctttgtgtttgctctgatgaatggtatctttcaaccacccttcactgccatagtt 771
Query: 61 gagatgaagcaaacataagattctcaaacaaattttgatatcatgtctcagactcagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gagatgaagcaaacataagattctcaaacaaattttgatatcatgtctcagactcagaaa 711
Query: 121 aagaaaaacattgattttatggtgcttggcataagaaacatcataatgttttaataaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aagaaaaacattgattttatggtgcttggcataagaaacatcataatgttttaataaatt 651
Query: 181 taatcttgaaaagcctatcattcattgaaataaaaatggataggtactgcaatgttccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 taatcttgaaaagcctatcattcattgaaataaaaatggataggtactgcaatgttccat 591
Query: 241 taatgagaaaattccatttagaaatagaattggagaggttctagtataacaatgtgagat 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 taatgagaaaatcccatttagaaatagaattggagaggttctagtataacaatgtgagat 531
Query: 301 atcaaattacttctttggtttacagtgatggagatgtctgaaaaagcagttgataaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 atcaaattacttctttggtttacagtgatggagatgtctgaaaaagcagttgataaactc 471
Query: 361 ctcttgaagtaaaaagacagtacctttcttgagaaattgagtaacactttcaactttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ctcttgaagtaaaaagacagtacctttcttgagaaattgagtaacactttcaactttctg 411
Query: 421 tatgaaccaattcacaaacagagctttgaactt--aaaaaaaaaagacatactatttttt 478
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 410 tatgaaccaattcacaaacagagctttgaacttaaaaaaaaaaaagacatactatttttt 351
Query: 479 atctgtataagaattgtcagaatgtgctttttgaaaatttggcgtgtacttgacaattct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 atctgtataagaattgtcagaatgtgctttttgaaaatttggcgtgtacttgacaattct 291
Query: 539 ttctactgaaataagaatttgaaagttgaagcaggaactggatagaagccaagtgtattg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttctactgaaataagaatttgaaagttgaagcaggaactggatagaagccaagtgtattg 231
Query: 599 tgtacgacatgcctgatccactcttagtaa 628
||||||||||||||||||||||||||||||
Sbjct: 230 tgtacgacatgcctgatccactcttagtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1030
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1020
Effective search space: 630360
Effective search space used: 630360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
