Query= MSMg01no451_p05.b1 MSMg01no451_p05.b1 CHROMAT_FILE:
MSMg01no451_p05.b1 PHD_FILE: MSMg01no451_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:22 2005
(664 letters)
>mm_chr13_51291059_51292123
Length = 1065
Score = 540 bits (279), Expect = e-157
Identities = 303/311 (97%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 5 gaattccc-aattctgtggagagctgtctctgacagctcagctgaatagctaccccttct 63
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaattcccaaactctgtggagagctgtctctgacagctcagctgaatagctaccccttct 252
Query: 64 tcaggaggactctagcctaggccgactggtttagaaaattactcatcacttgcccagggc 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcaggaggactctagcctaggccaactggtttagaaaattactcatcacttgcccagggc 192
Query: 124 caagattaccatgtgtcttcaccagccagtgagtgaggaacctcatacatcttagattcg 183
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 191 caagattaccatgtgtcttcaccagccagtgagtgaggaacctcacacatcttagattcg 132
Query: 184 aaggcaggctccccacagaaatcatgcttgtgtggtggggaataattaaccctagactaa 243
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 131 aaggcaggctccctgcagaaatcatgcttgtgtggtggggaataactaaccctagactaa 72
Query: 244 atgttgctatgggtaaaacgtagcttagggctcagccctgaaggggacatctatataaag 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atgttgctatgggtaaaatgtagcttagggctcagccctgaaggggacatctatataaag 12
Query: 304 ctgcaacccaa 314
|||||||||||
Sbjct: 11 ctgcaacccaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1065
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1055
Effective search space: 689970
Effective search space used: 689970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_p05.g1 MSMg01no451_p05.g1 CHROMAT_FILE:
MSMg01no451_p05.g1 PHD_FILE: MSMg01no451_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:22 2005
(177 letters)
>mm_chr13_51137192_51137766
Length = 575
Score = 321 bits (166), Expect = 1e-92
Identities = 172/174 (98%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 1 agtagccagagccttttaaaaccctggtaacaagctgtgatggtatccaacttcccttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagccagagccttttaaaaccctggtaacaagctgtgatggtatccaacttcccttca 260
Query: 61 tccaccctgcccccagactctagtgactgctctcccacacatgggtaggctactttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaccctgcccccagactctagtgactgctctcccacacatgggtaggctactttttaa 320
Query: 121 tttctacataagaaagcgtgtgtggtatttgtgttggtgntacagaacaattcc 174
||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 321 tttctacataagaaagcgtgtgtggtatttgtgttggtg-tacaga-caattcc 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 575
Length adjustment: 8
Effective length of query: 169
Effective length of database: 567
Effective search space: 95823
Effective search space used: 95823
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
