NACTAAAATTTGCGGCGCTAAACGACTCCTATTTCGAGAGGATGGGCGGA
ATTCTGCACTTACCAGGAATCTTTGTATTTCCATCTGGGCCTTGGCTACA
TGGCCCAGGGAGTAAAGGAGCTTGCCTCTAAGCCTGACTATCTGAGTTCT
AATCCCCAGGACCCACATGATGGAAGAAGAGAACTAACTCATCCAAGTTG
CTCCCACTCGTACATTAAATAAAGGTGATAAAAATTAACTTAAGGGCCAG
AGAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGA
GTTCAATTCCCAGAAACCACAGATGCCCTCTTCTGGTGTGTCTGAAGACA
AGTGACAGTGTTCTCACATACAATAAATAAATAAATAAAGTAATAAAGTA
ATTAATTAATTAATCTTCTTTTTTTAAATTAGCTTCCATTTGACCAAAAG
ACAAGATTCAAGATGTACTGAAAAATCATAAAGAAAAACTGGAAACGAAG
ATTGGACTGAAGATAGAGGCAGGCGAGAAAGAACAAGGATTCCAGGAACC
GGGCACCCAGGCAGCCTCAGGGTGATGGGAAATCGGGGCATGCACAAAGG
GCATCATCATTGCTCCGTCAGTGTGGTGAAACGAACAAGGGGAAGCCCAT
GTGTGGAAGGTAAGGGTGATGTGTTTGCTTAAGCTCGTGAATGGCTATTC
AGCAACACTGAGTGTAGCAGCCCCTCCTTACCCACTGGGAATGCGTCCCG
AGACCCTAAAGA

CCCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTCAGGGTGGTGCCAAGTTCCATTT
GGAATTTATTTATGGTTGCTTGAGTGGAGAAGCCATTGTCTTAAAAAACC
TTGGTGTTGCTAAACTGCCAGTTACTGTTGTAACTTTTGGTGAGTTTCAC
CATTGAAAGGGTCATCCAAGGGTCATGCCATGGTTGTTGACATACCCTAT
GCAATATCAAAATTGAATAGAGGTATCAGATAAAATAACAGATGGGAATG
AAGCTTGTATATCACCCATTATCATGTGTATATATCAATAAACGATTTAA
TTCTCTTGAAGGAAAAAAAAAAAGATGGGAACATGGCATCATTCAGGCAG
TCATGATACAGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCT
AGCAGAATACTGACTTCCAGGAAGCTAGGATGAGGGTCTTAAAGCCCACA
CCCACAGTGACACACCTTCTCCAACAAGGCCACACCTTCGAATAGTGCCA
CTCCCTGAGCCAAGCATATCCAAACCATCACTCTGAGCTAATTTTTGTTT
TTAACTGTTTTGTTTGTGAGTCATCCATCATGCTTCTATTTGTGCTGATT
ATCTTTAGCAAAGGATAAAGTTAAGCCAACGTCTAGGGTTGGCCTTGAAT
CCCAGAGATCCAAGTGCTACTGCGTCTTGGATCAAAGGCATGTGCCGCCA
CACCCAGCACAA

Query= MSMg01no452_b13.b1 MSMg01no452_b13.b1 CHROMAT_FILE:
MSMg01no452_b13.b1 PHD_FILE: MSMg01no452_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:33 2005
         (693 letters)



>mm_chr13_53222802_53223893
          Length = 1092

 Score = 1151 bits (595), Expect = 0.0
 Identities = 678/723 (93%), Gaps = 33/723 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctttgtatttccatctgggccttggctacatggcccagggagtaaaggagcttgcctct 60
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 173 tctttgtatttccatctaggccttggctacatggcccagggagtaaaggagcttgcctcc 232

                                                                       
Query: 61  aagcctgactatctgagttctaatccccaggacccacatgatggaagaagagaactaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aagcctgactatctgagttctaatccccaggacccacatgatggaagaagagaactaact 292

                                                                       
Query: 121 catccaagttgctcccactcgtacattaaataaaggtgataaaaattaacttaagggcca 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 293 catccaagttgctcccactcgtacattaaataaaggtaataaaaattaacttaagggcca 352

                                                                       
Query: 181 gagagatggctcagcaggtaagagcactgactg----ctcttccagaggtcctgagttca 236
           |||||||||||||||||||||||||||||||||    |||||||||||||||||||||||
Sbjct: 353 gagagatggctcagcaggtaagagcactgactgactgctcttccagaggtcctgagttca 412

                                                                       
Query: 237 attcccagaaaccacagatgccctcttctggtgtgtctgaagacaagtgacagtgttctc 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 attcccagaaaccacagatgccctcttctggtgtgtctgaagacaagtgacagtgttctc 472

                                                                       
Query: 297 acatacaataaataaataaataaa----------------gtaataaagtaat----taa 336
           ||||||||||||||||||||||||                |||||||||||||    |||
Sbjct: 473 acatacaataaataaataaataaataaataaataaataaagtaataaagtaataaagtaa 532

                                                                       
Query: 337 ttaattaatct--tctttttttaaa----ttagcttccatttgaccaaaagacaagattc 390
           ||||||||| |  |||||||  |||    |||||||||||||||||||||||||||||||
Sbjct: 533 ttaattaat-taatcttttt--aaaaaaattagcttccatttgaccaaaagacaagattc 589

                                                                       
Query: 391 aagatgtactgaaaaatcataaagaaaaactggaaacgaagattggactgaagatagagg 450
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 590 aagatgtactgaaaaatcataaagaaaaactggaaacaaagattggactgaagatagaga 649

                                                                       
Query: 451 caggcgagaaagaacaaggattccaggaaccgggcacccaggcagcctcagggtgatggg 510
           ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 650 caggcaagaaagaacaaggattccaggaaccgggcacccaggcggcctcagggtgatggg 709

                                                                       
Query: 511 aaatcggggcatgcacaaagggcatcatcattgctccgtcagtgtggtgaaacgaacaag 570
           ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 710 aaaccggggcatgcacaaagggcatcatcattgctccgtcagcgtggtgaaacgaacaag 769

                                                                       
Query: 571 gggaagcccatgtgtggaaggtaagggtgatgtgtttgcttaagctcgtgaatggctatt 630
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gggaaggccatgtgtggaaggtaagggtgatgtgtttgcttaagctcgtgaatggctatt 829

                                                                       
Query: 631 cagcaacactgagtgtagcagcccctccttacccactgggaatgcgtcccgagaccctaa 690
           ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 830 cagcaacactgagtgtagcagcccctccttacccactgggaatgcgtcctgcgaccctaa 889

              
Query: 691 aga 693
           |||
Sbjct: 890 aga 892


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1092
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1082
Effective search space:   739006
Effective search space used:   739006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)