NNNNTTTCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTTTCCCTTTTACTGCTGAGGCAGATGAGCTTGTCAG
GGCTCAGAAAGCGATCACATGTGAAGTGGCTGGCAAGAGATGAAGCCACA
AATTCTATCAGTGTCTGTGTAACCCCATCTCTCAGTTTGTTACTCTGCCT
CTCTTGATCAGTATAGAGACGATCTTATTAGCATGGACTAAGGTCATGAT
ATGGCCTGAGTATCTTTTATTAAAGTCATTTACAGTTTTATTTGTTGGCC
CACCAAAAAAAAAAAGCACATATTTTCTTCTACCTAGCATGGTACCCTGC
TTTGTGGAAGTATGTCCTTGGCCTTCTGAGTTGTCAAACAGGTTCCAGAT
GTGTTCTTTAAGGTTCCAGATGTGTTCTTTAAGGTTCCAGATGTGTTCTT
TAAGGTTCCAGATGTGTTCTTTAAGGTTCCAGATGTGTTCTTTAAGATTT
GGGATCATGTATTCTCTCTCTAGGTCAAGTGGTCCCTAGGAGAGGGAAGA
TGGTAACACCTCTTGCAACCGACAGACCACTACAGAGGCTTTTCCCACCT
CAGTGACCAAGCCTTGCTAATTTTCCTCATAGGTGTAATCTGTTCTTACT
TTAAAAATGTTTTTCTTTTCTGGAGGGTGGATAATATTGTTACCATAAGA
AATATGTTTTTAAATGAAAATCCCACTACCAGGCACAACGTATCTTCTTC

NNNNNCCTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAAAACATTGCTA
AACAGGTAGAAGACCTTAAAAAGGAAAAATCCTTAAAGAATTATAGGAAA
ACACAACCAAACAGGTGATGGAATTGAACAAAACCATCCAAGATCTAAAA
ATGGGAGTAGAAACAATGAAGAAAACCCAAAAGGAGACAACTCTGGAGAT
AGAAATTCTAGGAAAGAAATCAGGAATCACAGATGTGAGCATCAGCAACA
GAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAAATTCTATAGAA
AACATGGACACAATAATCAAAGAAAATGCAAAATGCAAAACTATCCTAAC
TCAAAACATTCAGGAAATTCAGGACACAATAAGAAGACCAAACCTAAGGT
ATAAATAAGAATGAAGATTTTCAACCTAAAGGGCCAGTAAATATCTTCAA
AAAATTATAAAAGAAAACTCCCCTAACGTAAAGAAAGAGATGCTCATGAA
CATACAAGAAGCCTACAGAACTCCAAATAGACTGGAACAGAAAAGAAATT
CCTCCTGACACATAATAATCAGAACAACAAATGCACTAAATAAAGATAGA
ATATTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACGTGTGAAGGATTAGA
ATTAAACCAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATCCTGGTC
AGATG

Query= MSMg01no452_l05.b1 MSMg01no452_l05.b1 CHROMAT_FILE:
MSMg01no452_l05.b1 PHD_FILE: MSMg01no452_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:20 2005
         (696 letters)



>mm_chr13_102881913_102883013
          Length = 1101

 Score =  899 bits (465), Expect = 0.0
 Identities = 595/697 (85%), Gaps = 92/697 (13%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttttcccttttactgctgaggcagatgagcttgtcagggctcagaaagcgatc 64
           ||||||   ||||||||| | | |||||||||||||||||||||||||||||||| ||||
Sbjct: 208 gaattc---ttcccttttgcagatgaggcagatgagcttgtcagggctcagaaagtgatc 264

                                                                       
Query: 65  acatgtgaagtggctggcaagagatgaagccacaaattctatcagtgtctgtgtaacccc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 acatgtgaagtggctggcaagagatgaagccacaaattctatcagtgtctgtgtaacacc 324

                                                                       
Query: 125 atctctcagtttgttactctgcctctcttgatcagtatagagacgatcttattagcatgg 184
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 atctctcagtttgttactctgcctctcttgatcagtataaagacgatcttattagcatgg 384

                                                                       
Query: 185 actaaggtcatgatatggcctgagtatcttttattaaagtcatttacagttttatttgtt 244
           ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 385 actaaggtcatgatatggcctgagtatcttttattgaagttatttacagttttatttgtt 444

                                                                       
Query: 245 ggcccacc---aaaaaaaaaaa--gcacatattttcttctacctagcatggtaccctgct 299
           ||||||||   |||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggcccaccaaaaaaaaaaaaaaaagcacatattttcttctacctagcatggtaccctgct 504

                                                                       
Query: 300 ttgtggaagtatgtccttggccttctgagttgtcaaacaggttccagatgtgttctttaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgtggaagtatgtccttggccttctgagttgtcaaacaggttccagatgtgttctttaa 564

                                                                       
Query: 360 ggttccagatgtgttctttaaggttccagatgtgttctttaaggttccagatgtgttctt 419
           |                                                           
Sbjct: 565 g----------------------------------------------------------- 565

                                                                       
Query: 420 taaggttccagatgtgttctttaagatttgggatcatgtattctctctctaggtcaagtg 479
                                    |||||||||||||||||||||||||||||||||||
Sbjct: 566 -------------------------atttgggatcatgtattctctctctaggtcaagtg 600

                                                                       
Query: 480 gtccctaggagagggaagatggtaacacctcttgcaaccgacagaccactacagaggctt 539
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 601 gtccctaggagagggaagatggtaacacctcttgcaactgacagaccactacagaggctt 660

                                                                       
Query: 540 ttcccacctcagtgaccaagccttgctaattttcctcataggtgtaatctgttcttactt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcccacctcagtgaccaagccttgctaattttcctcataggtgtaatctgttcttactt 720

                                                                       
Query: 600 taaaaatgtttttcttttctggagggtggataatattgttaccataagaaatatgttttt 659
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 721 taaaaatgtttttcttttctggagggtggataatattgttcccataagaaatatgttttt 780

                                                
Query: 660 aaatgaaaatcccactaccaggcacaacgtatcttct 696
           |||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaatgaaaatcccactaccaggcacaacgtatcttct 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1101
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1091
Effective search space:   748426
Effective search space used:   748426
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)