Query= MSMg01no453_c03.b1 MSMg01no453_c03.b1 CHROMAT_FILE:
MSMg01no453_c03.b1 PHD_FILE: MSMg01no453_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:54 2005
(654 letters)
>mm_chr13_42151024_42152077
Length = 1054
Score = 1251 bits (647), Expect = 0.0
Identities = 649/650 (99%)
Strand = Plus / Plus
Query: 5 gaattcctccccgatcctttacgtgtctctgggagattgaaccctgggcttcaagcatgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctccccgatcctttacgtgtctctgggagattgaaccctgggcttcaagcatgc 264
Query: 65 tagtgagatgtcgtgtcagtgagctttgctactgtatgctgttggaggtttacttctgta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagtgagatgtcgtgtcagtgagctttgctactgtatgctgttggaggtttacttctgta 324
Query: 125 cattatatcaagacaaagaagtgaaagaaagttggaactcacatttatatactactttac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattatatcaagacaaagaagtgaaagaaagttggaactcacatttatatactactttac 384
Query: 185 ttgcagaagttagaacaaactgacttattttcaacagagaaatatcctgtcaaacttgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgcagaagttagaacaaactgacttattttcaacagagaaatatcctgtcaaacttgta 444
Query: 245 tataaggctagagatctcgcttggggttagactatgggcttaacttgcttatggctctgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tataaggctagagatctcgcttggggttagactatgggcttaacttgcttatggctctgg 504
Query: 305 attccgttcccagcaccaagcaaagcaaaacaaacaggacatgtaacacatttcatacgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attccgttcccagcaccaagcaaagcaaaacaaacaggacatgtaacacatttcatacgg 564
Query: 365 ctgcaaggtgaatggttttccattaaaagtaaaggtatttaatactgggaaactaagcat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgcaaggtgaatggttttccattaaaagtaaaggtatttaatactgggaaactaagcat 624
Query: 425 attttgctatatctgtttaacgattgttattgttttgaggtgttatattcactgtgaata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attttgctatatctgtttaacgattgttattgttttgaggtgttatattcactgtgaata 684
Query: 485 gcagttatcttttctatttgattccagtatatagggatttagcagtattgaacttgtgag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcagttatcttttctatttgattccagtatatagggatttagcagtattgaacttgtgag 744
Query: 545 aggtctcagttggnacaacgctggttgtgctactaggaggacccgagttaagatgtctag 604
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aggtctcagttggtacaacgctggttgtgctactaggaggacccgagttaagatgtctag 804
Query: 605 aagccacggaagaccagaagcagtagtgtaggtctgcagtcacagtctgt 654
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aagccacggaagaccagaagcagtagtgtaggtctgcagtcacagtctgt 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_c03.g1 MSMg01no453_c03.g1 CHROMAT_FILE:
MSMg01no453_c03.g1 PHD_FILE: MSMg01no453_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:54 2005
(513 letters)
>mm_chr13_42313131_42314043
Length = 913
Score = 980 bits (507), Expect = 0.0
Identities = 510/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Minus
Query: 1 tacatcttgatccccaagaagcagaaggagaccctgtgccacactggatgtatcttgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tacatcttgatccccaagaagcagaaggagaccctgtgccacactggatgtatcttgagc 678
Query: 61 atgagagacctcaatgcaccacctccaccgtgacacattttctcctaatagtgctgatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atgagagacctcaatgcaccacctccaccgtgacacattttctcctaatagtgctgatcc 618
Query: 121 cttatgggccaagcattcaaacacgagtgtgtgtgtgggggggtggcatacctattcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cttatgggccaagcattcaaacacgagtgtgtgtgtgggggggtggcatacctattcaaa 558
Query: 181 ccaccagtgacctttgactaaagctgataccacaggtaatgggtcacagaaagacaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccaccagtgacctttgactaaagctgataccacaggtaatgggtcacagaaagacaaaag 498
Query: 241 ggagccagtatccatccaactagttgaggatggtgataaactgcgtttcccatccttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggagccagtatccatccaactagttgaggatggtgataaactgcgtttcccatccttgag 438
Query: 301 atgtgcttttaatttgaatatttaaaagaaccagaggtgctattacttagttgtaatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgtgcttttaatttgaatatttaaaagaaccagaggtgctattacttagttgtaatctc 378
Query: 361 agcatgcaagaggctgaggtagactattaatctgaagccagcatgggtgacccaagtgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agcatgcaagaggctgaggtagactattaatctgaagccagcatgggtgacccaagtgag 318
Query: 421 ccttttctcaaaaataaagaggttagaagcgatgggtggcctcataaactctccagactt 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccttttctcaaaaataaagagg-tagaagcgatgggtggcctcataaactctccagactt 259
Query: 481 tctgaatgcaacagggcagttgtgcacatga 511
|||||||||||||||||||||||||||||||
Sbjct: 258 tctgaatgcaacagggcagttgtgcacatga 228
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
