Query= MSMg01no453_e07.b1 MSMg01no453_e07.b1 CHROMAT_FILE:
MSMg01no453_e07.b1 PHD_FILE: MSMg01no453_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:05 2005
(681 letters)
>mm_chr13_55802498_55803578
Length = 1081
Score = 1251 bits (647), Expect = 0.0
Identities = 671/679 (98%), Gaps = 4/679 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggctcta-tccacaactgtagccatccatccat-cccctttcctgggatagag 62
|||||||||||| | | ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 881 gaattcaggctccagt-cacaactgtagccatccatccatccccctttcctgggatagag 823
Query: 63 ctcctgataaacactgttataaacatatcgccttacaccaatgtcccatctcatgaacac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ctcctgataaacactgttataaacatatcgccttacaccaatgtcccatctcatgaacac 763
Query: 123 gtatcggaaacgcattatgcagtagcccactctatcttctgacgcattatacagtaaacg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gtatcggaaacgcattatgcagtagcccactctatcttctgacgcattatacagtaaacg 703
Query: 183 cattatgcagtagcccactctgtctgctgacgcagcacagcacagcaccactgagtacat 242
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 702 cattatgcagtagcccactctgtctgctgacgcagcgcagcacagcaccactgagtacat 643
Query: 243 gcgctggcaagcggagggaaggggatgcgtgtgggaagggcaagaagaaatgacaaggta 302
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gtgc-ggcaagcggagggaaggggatgcgtgtgggaagggcaagaagaaatgacaaggta 584
Query: 303 caaagccaggaatgaaatcaaactcaaaaggatgccgtgtggactcaccatgaaacacaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 caaagccaggaatgaaatcaaactcaaaaggatgccgtgtggactcaccatgaaacacaa 524
Query: 363 catgcacccaagtccttaacatttggtggtgagacgataccacactagactatttcaact 422
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 523 catgcacccaagtccttaacatttggtggtgagatgataccacactagactatttcaact 464
Query: 423 gtattcaggaactagctgtgcaaggattttaaaacagccagctgctgaacaacttcagaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gtattcaggaactagctgtgcaaggattttaaaacagccagctgctgaacaacttcagaa 404
Query: 483 acagctaagtgacagatactgtgaccagatgaacacatcaatgaagatgcaagcatttgc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 acagctaagtgacagatactgtgaccagatgaacacatcaatgaagatgcaagcatttgc 344
Query: 543 ctgtgtcagaagttacactgtcctaagtaaattatttttatattctaggcttctgcaaga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctgtgtcagaagttacactgtcctaagtaaattatttttatattctaggcttctgcaaga 284
Query: 603 agaaactctttgaagcactttagtggttaaatggtcacccagcactgctcactgtcttct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agaaactctttgaagcactttagtggttaaatggtcacccagcactgctcactgtcttct 224
Query: 663 atggtttgtgtgaagctct 681
|||||||||||||||||||
Sbjct: 223 atggtttgtgtgaagctct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_e07.g1 MSMg01no453_e07.g1 CHROMAT_FILE:
MSMg01no453_e07.g1 PHD_FILE: MSMg01no453_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:05 2005
(650 letters)
>mm_chr13_55661384_55662433
Length = 1050
Score = 1224 bits (633), Expect = 0.0
Identities = 647/653 (99%), Gaps = 3/653 (0%)
Strand = Plus / Plus
Query: 1 ctacagcaggccttcagctgtttgttcctaacaagttcacactaggcattagctggtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ctacagcaggccttcagctgtttgttcctaacaagttcacactaggcattagctggtcac 257
Query: 61 aatcctccccttaagtctactgcccttacttcctgttctcaggaccatgtaatttggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aatcctccccttaagtctactgcccttacttcctgttctcaggaccatgtaatttggaag 317
Query: 121 ggccacccccaaaagccctcagattctggtgtctttctcaggatacaa---gctgtgggg 177
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 318 ggccacccccaaaagccctcagattctggtgtctttctcaggatacaaggcgctgtgggg 377
Query: 178 ctaggagatttgccatttctttgttgttttgagaaagggtctcaccacctcaccaccagg 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ataggagatttgccatttctttgttgttttgagaaagggtctcaccacctcaccaccagg 437
Query: 238 gatggggcatggtgacaatgggagtacctctaatcccagcacttgggaggcagaggcaga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gatggggcatggtgacaatgggagtacctctaatcccagcacttgggaggcagaggcaga 497
Query: 298 ggactatctaaagtttgaggtcagattgatctccagagtaagtttcaggacagccttcag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggactatctaaagtttgaggtcagattgatctccagagtaagtttcaggacagccttcag 557
Query: 358 aggctttacagagaaaccttgtctcaaggggaaaaagagagtgtggggtggggggaggca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aggctttacagagaaaccttgtctcaaggggaaaaagagagtgtggggtggggggaggca 617
Query: 418 ttcactataagctcaggctaccaccgaactcacagtcttcctgcctcagcctcctaagtg 477
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttcactataagctcaggttaccaccgaactcacagtcttcctgcctcagcctcctaagtg 677
Query: 478 ctaggactacaggggtgtgccactatatctgactctcttgacattttcatttctgctttt 537
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctagggctacaggggtgtgccactatatctgactctcttgacattttcatttctgctttt 737
Query: 538 ttatttttctaagtatgtttttattatttttaattatgcctatgtgtttacaggtacttt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttatttttctaagtatgtttttattatttttaattatgcctatgtgtttacaggtacttt 797
Query: 598 tggcagccagaattactggaggtaatttataggcagttatatgagccatccta 650
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tggcagccagaattactggaggtaatttataggcagttatatgagccatccta 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
