TCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGATTTTCCCAGCTACTGAGAGAGGTGCTGTCTCCAAAACAAAAC
AAAACAAAACAAACAACCCCACACCAAATCTGCTATTGAGTTTTATGCAC
AAAAGTGTGTCCATGTGCTTTTGTTAGTTTTTGGTAAATGTACCAACTAT
GTAATAGATAGGAGATTGTATAGTTAATTTTTAAAGAAACAGTTGAACTT
GGAAATAAGTTTTGATGTGTTATATTTATTTTCATCTTCAAATTGTTTCA
AAATTCCATTTGTCTTATTTTTCCAGTATGCTTATTTATTTACTAGCACT
TGGAATTTTTCTACTTAGCTTTCTGTTTTCAGGGTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
TTCCTTTCTTCCTTTCTTCCTTCCTTTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCAACTTCNA
CAACAGGAATACTTCTTTTGATTTTTAATCCCTTCATCATTTCTAAATTG
TAGTTTTTACCCCCTGTTTTGCCCACAAATTTATTTCCCTAAATAATTTT
TGTGGTCTGAATATCATAATTCTTTTATCCCTTTTCCTATACACCTCCTA
ATGTTCCTTCCTCACGCCTGTTTTTTCTTTTCTTTCTACCACTTATTATT
TG

CCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTTTCGACGAAATCAGAAATCCACCTGCCTCTCCCTCCCAAGTG
CTGGGATTAAAGGTGTGCGCCACCACCGCCCTGCTTGTCCTTTTCTTTTT
TTTAAACTGATTCTCTAATCACATTTTGTGTGGGAATATCTGGCTGTTGA
GCACCAACTCCTTAAAAGACTCTTCCCTCCATTATATTATCTTTACTCCT
TTTCAAAGATCATTAGCTTTCATTTGTGATTCTATTTCTGGAATATATAC
TCAGTTAACATTGTTTTATTTGTCTATTCATTTGCCAATACCATACTGTA
TTGATTACGGTAGTCTTTTAGTAAATCTTTAAATTGATACTGCCAAGCTT
CTAGTTATTCAGTGTATGTGTGTGTGTGTGTGTGAGAGAGAGAGAGCATG
AGAGAGCAAGCAAGAGAGAGACAGATAGACAGACACACAGACAGAAAAAG
ACAGAGAATCAGAGATGGAGAGAAAACACACATATACAGGATGGAGAGAG
AATGAAGAGGACGAGGATTAGGATAATTCCCTCCTCTTCCCTTGCATATT
CCCTCTTTTTACTTGTTTTTAAATAATTGTCACATTTTTATTTTTTTTTT
TTTGCGTCAATCCCCCAACCTTCTCCTTTTTCCCTCCCACCCTCTTTTTC
TTCTTACCCTCCCCCTTCCTCGTTTTTGTTTCCCTCTCATCTACTTTTTT
TTTT

Query= MSMg01no454_c19.b1 MSMg01no454_c19.b1 CHROMAT_FILE:
MSMg01no454_c19.b1 PHD_FILE: MSMg01no454_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:17 2005
         (479 letters)



>mm_chr13_46502128_46503006
          Length = 879

 Score =  654 bits (338), Expect = 0.0
 Identities = 418/452 (92%), Gaps = 15/452 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   tactgagagaggtgctgtctccaaaacaaaacaaaacaaaacaaacaaccccacaccaaa 60
           |||||||||||||||||||||     ||||||||||||||||||||||||||||||||||
Sbjct: 555 tactgagagaggtgctgtctc-----caaaacaaaacaaaacaaacaaccccacaccaaa 501

                                                                       
Query: 61  tctgctattgagttttatgcacaaaagtgtgtccatgtgcttttgttagtttttggtaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctgctattgagttttatgcacaaaagtgtgtccatgtgcttttgttagtttttggtaaa 441

                                                                       
Query: 121 tgtaccaactatgtaatagataggagattgtatagttaatttttaaagaaacagttgaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtaccaactatgtaatagataggagattgtatagttaatttttaaagaaacagttgaac 381

                                                                       
Query: 181 ttggaaataagttttgatgtgttatatttattttcatcttcaaattgtttcaaaattcca 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 ttggaaataagttttgatgtgttatatttattttcatcttcaaatcgtttcaaaattcca 321

                                                                       
Query: 241 tttgtcttattttt----ccagtatgcttatttatttactagcacttggaatttttctac 296
           ||||||||||        ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttgtcttat----gaaaccagtatgcttatttatttactagcacttggaatttttctac 265

                                                                       
Query: 297 ttagctttctgttttcagggtctttctttctttctttctttctttctttctttctttctt 356
           ||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 264 ttagctttctgttttcaggatctttctttctttcttcctttcttcctttcttcctttctt 205

                                                                       
Query: 357 tctttctttctttctttctttctttcttcctttcttcctttcttccttcctttct--ctc 414
            ||| ||| ||| ||| ||| ||| ||||||| ||||||| ||||||||||| ||  || 
Sbjct: 204 ccttccttccttccttccttccttccttccttccttccttccttccttccttccttcctt 145

                                           
Query: 415 tctctctctctctctctctctctctctctctc 446
           ||||||||||||||||||| ||| ||| ||||
Sbjct: 144 tctctctctctctctctctttctttctttctc 113


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space:   407561
Effective search space used:   407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)