Query= MSMg01no454_i02.b1 MSMg01no454_i02.b1 CHROMAT_FILE:
MSMg01no454_i02.b1 PHD_FILE: MSMg01no454_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:43 2005
(461 letters)
>mm_chr13_17094593_17095453
Length = 861
Score = 808 bits (418), Expect = 0.0
Identities = 439/448 (97%), Gaps = 5/448 (1%)
Strand = Plus / Plus
Query: 5 gaattcccttca---ttccagctgttatttggaagtgtaagctaaaataaacctttcttg 61
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcccttcaggata--agctgttatttggaagtgtaagctaaaataaacctttcttg 261
Query: 62 gccaaggttacttttgatcttggtgtttatcatagcaacagaaagcaaattagggcagct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gccaaggttacttttgatcttggtgtttatcatagcaacagaaagcaaattagggcagct 321
Query: 122 tgtcagggactcaaaagcagcagtactggaaagtcttcttcttgcacagaagaagacatc 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 322 tgtcagggactcaaaagcagcagtactggaaagtcatcttcttgcacagaagaagacatc 381
Query: 182 cccatagcaccacagatggagtatcccttacccttcaattaaccttgtttaatttacaaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cccatagcaccacagatggagtatcccttacccttcaattaaccttgtttaatttacaaa 441
Query: 242 ctcttacacctccagaggccctgaggacacatatttttagagcagaattgcatacaaatg 301
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 442 ctcttacacctccagaggccctgaggacacatataattagagcagaattgcatacaaatg 501
Query: 302 gttgggaggtgcaggaggaaacagctggattctcaggtgaagagaataaccctccccacc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gttgggaggtgcaggaggaaacagctggattctcaggtgaagagaataaccctccccacc 561
Query: 362 cactccttttctaagtgaatgacaacagccaataggcttgcttgtgatcctcccttgcaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cactccttttctaagtgaatgacaacagccaataggcttgcttgtgatcctcccttgcaa 621
Query: 422 cctgccataactgatttgatgaaaatgg 449
||||||||||||||||||||||||||||
Sbjct: 622 cctgccataactgatttgatgaaaatgg 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_i02.g1 MSMg01no454_i02.g1 CHROMAT_FILE:
MSMg01no454_i02.g1 PHD_FILE: MSMg01no454_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:43 2005
(224 letters)
>mm_chr13_17226158_17226781
Length = 624
Score = 416 bits (215), Expect = e-121
Identities = 221/223 (99%)
Strand = Plus / Minus
Query: 1 tctttgtctactattgagttattagtttctctacttgttccctgcatttccttttgcata 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 423 tctttgtctactattgagttattagtttctctacttgttccctgcatttcattttgcata 364
Query: 61 tcttaacagtaacctccatttgcatctcacataccagtgtacttattggattaatgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcttaacagtaacctccatttgcatctcacataccagtgtacttattggattaatgaagt 304
Query: 121 ttggggaggttttgtatcatgttcttccatatttttattaacatgtctgctatttagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttggggaggttttgtatcatgttcttccatatttttattaacatgtctgctatttagaag 244
Query: 181 cagatgactctctcgtgagtagtaaatggcacatgatttatga 223
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 243 cagatgactctctcgtgagtagcaaatggcacatgatttatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
